Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01785 ATGACGCAAGCTTTGGGCTGCTGCTGTTTTCTACATAGAAAAGAAGCAAAGAATCATCATGATATTCTCAAAGAAAGCTCAGTTGGGAATGACAGCACCACTTTGGAGTCATTGCGATTTGAGTTGGCCAAAATTGAAGCTGCAACAAATAGATTTGCTAAAGAAAATATGATAGGCAAAGGCGGATTTGGAGAGGTCTATAGGGGTATTCTTTCGGATGGACAAGAAATAGCTGTGAAGAGGCTTACAGGAAGCTCCCGGCAAGGTGCGGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCTAAGCTTCAACACAGAAATCTAGTGAGGATGATGTATTGGGATGTTTAA 351 0.4074 MTQALGCCCFLHRKEAKNHHDILKESSVGNDSTTLESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRMMYWDV 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01785 116 SUPERFAMILY Protein kinase-like (PK-like) 30 114 IPR011009 -
Cca04g01785 116 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 112 - -
Cca04g01785 116 ProSiteProfiles Protein kinase domain profile. 52 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01785 116 Gene3D Phosphorylase Kinase; domain 1 5 114 - -
Cca04g01785 116 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 112 - -
Cca04g01785 116 Pfam Protein kinase domain 53 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01785 116 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01785 Cca-Chr4 32346673 32349965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01785 9 112 Receptor kinase-like Gene Family AT4G23140 55.769 2.70e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca04g01785 Pkinase 9.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01785 - - gmx:100793219 195.667