Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01733 ATGGGGACCCAAACTATGGGGTCTCATGGTGGTGGTGGAGATAGTAATGGAAAACAGTCCCCACAGCGGCCTCTGGTGCGGCAAAACTCGATGTACAGTCTCACCCTTGATGAGGTTCAGAATCAATTGGGTGATTTGGGGAAGCCGCTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACCGTTGAGGCAAGCCAGACCATTGGTGTGGACAATGAGGGCACAGCACAAGCTAGTCAATCTGCTCTGCAGCGTCAGGCTAGTCTGTCATTAACTGGAGCACTAAGCAAGAAAACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAATCAATGAGGAGAAGAAGTTCCGAGACCGACAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGATGCATCTTCTAATATAAAGAACACTGGTACTATTATTGGGGTTGATTCAAACGTGGCGATACCACAGTTTCCTTCGCAGGGACAGTGGATACAATATCAACAAGCACAATATCCGCATCCCCAACAAGGTTTAATGGGGATTTATATGCCTGGCCAGGGTATAGCACAACCATTACACATGGGGGCTGGTGCTTCGTTGGATGTTTCATTTGCAGATGGTCAGGTGGCATTGCCATCGCCGCTGATGGGAACAATGTCAGATGGGCAGACACCTGGAAGAAAAAGGAGCACTCCTGAGGACATGATAGAGAAAACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGGGAATCTGCTGCCCGTTCTAGAGCCAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAGGCTGAGGAAACGAAAGGAGCTAGAGAAGATGTTGCCATGTGCACCGCCTCCGGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 972 0.4681 MGTQTMGSHGGGGDSNGKQSPQRPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEASQTIGVDNEGTAQASQSALQRQASLSLTGALSKKTVDEVWRDIQQNKINEEKKFRDRQPTLGEMTLEDFLVKAGVVADASSNIKNTGTIIGVDSNVAIPQFPSQGQWIQYQQAQYPHPQQGLMGIYMPGQGIAQPLHMGAGASLDVSFADGQVALPSPLMGTMSDGQTPGRKRSTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPCAPPPEPKYQLRRIASAPF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01733 323 SMART brlzneu 249 317 IPR004827 GO:0003700|GO:0006355
Cca04g01733 323 Gene3D - 251 304 - -
Cca04g01733 323 CDD bZIP_plant_BZIP46 253 307 - -
Cca04g01733 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Cca04g01733 323 SUPERFAMILY Leucine zipper domain 253 298 IPR046347 GO:0003700|GO:0006355
Cca04g01733 323 MobiDBLite consensus disorder prediction 1 28 - -
Cca04g01733 323 Coils Coil 269 303 - -
Cca04g01733 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 321 IPR043452 GO:0003700|GO:0045893
Cca04g01733 323 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 19 321 - -
Cca04g01733 323 MobiDBLite consensus disorder prediction 260 323 - -
Cca04g01733 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
Cca04g01733 323 MobiDBLite consensus disorder prediction 225 244 - -
Cca04g01733 323 Pfam bZIP transcription factor 253 299 IPR004827 GO:0003700|GO:0006355
Cca04g01733 323 MobiDBLite consensus disorder prediction 260 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01733 Cca-Chr4 30087807 30093040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01733 18 323 bZIP Transcription Factor Family AT3G56850 55.128 8.38e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca04g01733 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01733 K14432 - gmx:100101875 515.383