Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01712 ATGAAAGAACAATTCTTTACACCTCTCAGCCCATTTTTCAACCTGCTCAAAACACCCATCATCGGCTCCGGCAAGTCCACGCTCATCGACGCACTCGCGGGGCGCATCTCCAAAGACAGCCAGAAAGGGTCCCTCACGCTGAACGGCGACGCTCTCGAATCCAGCCTCCTCAAAGTCATCACCATGCTCACTGTCGAAGAAACCCTCACCTTCGCCGTCGAGTTCCACCTCTCCCGCTCCCTCTCCAAGTCCAAGAAAAAAGCCCGCGTCCACGCCCTCATCGACCAGCTTGGCCTCCGCTTCGCTGCCTCCACCGTCATCGGCGACGAAGGCCACCGCAGCGTCTCTGCCAGCGAACGGCGCCGCGTCTCCATCGGCATCGACATCATCCACGACCCCATCGTCCTCTTCCTGGACGAACCTACCTCCGAACTCGACTCCACCAGCGCCTTCATAGTGGTAAAGGTCCTCCAGAGAATCGCTCAGAGCGGAAGCATCTTAAGCCTCTTGGACCGCTTGCTCTTCCTCTCCCACGGCAACACTGTCTTCAGCGGTTCTCTAGCGATGAAAGGGTTTTGGGTGTGGTTGGAGGTTGACGGCGTTGAAAGGGAAGTGTGCCTTTTAGGGTTTAGAATGGAAGATTTTAATAATTaa 654 0.5596 MKEQFFTPLSPFFNLLKTPIIGSGKSTLIDALAGRISKDSQKGSLTLNGDALESSLLKVITMLTVEETLTFAVEFHLSRSLSKSKKKARVHALIDQLGLRFAASTVIGDEGHRSVSASERRRVSIGIDIIHDPIVLFLDEPTSELDSTSAFIVVKVLQRIAQSGSILSLLDRLLFLSHGNTVFSGSLAMKGFWVWLEVDGVEREVCLLGFRMEDFNN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01712 217 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 22 188 - -
Cca04g01712 217 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 188 - -
Cca04g01712 217 Gene3D - 21 191 IPR027417 -
Cca04g01712 217 Pfam ABC transporter 22 143 IPR003439 GO:0005524
Cca04g01712 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 187 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01712 Cca-Chr4 28842972 28843792 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01712 22 173 Calmodulin-binding Proteins AT2G36910 29.091 6.20e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01712 K05681 - gmx:100803426 224.557