Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01706 ATGGTTGAGCAAGATGGATTCTTCCCTGCAGATCTGCTTTTCCTGGCTAGTACGAATGTAGATGGTGTCTACTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTGAAGATTAGTAAAGCATTGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGAATCTAAATTTAAAGGTTCACTTTTTCAAGGTATTAAGAAAAGTTAG 210 0.381 MVEQDGFFPADLLFLASTNVDGVYYIETANLDGETNLKISKALEKTWDYLTPEKESKFKGSLFQGIKKS 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01706 69 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 62 - -
Cca04g01706 69 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 2 62 - -
Cca04g01706 69 SUPERFAMILY Calcium ATPase, transduction domain A 2 46 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01706 Cca-Chr4 28576419 28576859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01706 2 62 Primary Pumps ATPases AT1G59820 70.492 7.36e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01706 K14802 - ccaj:109800359 116.316