Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g01699 | ATGCAACGATCAATTGTAGATACTGCTTATATATTTAATTCCATGGACTTGGGTCACAACAATAATAGAGAGACCAACGATAGACCTTTAGAATTAACTGCAGATGATGTTTATATCCTTGAGTCAATGTTAGGTCCAAATCACAATGATGATGATGATTTTGAAGTGCCTCCTGCAAATCAAGACTCTATTAAAAATCTTGAAGTTGTCACAATTCAAGAAAATGCAAACAAACCTATGGATTCACCATCATGTTCCATATGCCTAGAGGTACTTTCCAATGGATCAAAAGCAATTTGCATGCCTCAACCTTGTTTTCATATCTTTCATCAAAATTGCATTGTAAAGTGGCTCAACATTAGTGGCACATGTCCTTTGTGTCGTAGGACTATCTAG | 396 | 0.3586 | MQRSIVDTAYIFNSMDLGHNNNRETNDRPLELTADDVYILESMLGPNHNDDDDFEVPPANQDSIKNLEVVTIQENANKPMDSPSCSICLEVLSNGSKAICMPQPCFHIFHQNCIVKWLNISGTCPLCRRTI | 131 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g01699 | 131 | SMART | ring_2 | 85 | 127 | IPR001841 | - | |
Cca04g01699 | 131 | SUPERFAMILY | RING/U-box | 84 | 131 | - | - | |
Cca04g01699 | 131 | ProSiteProfiles | Zinc finger RING-type profile. | 85 | 128 | IPR001841 | - | |
Cca04g01699 | 131 | SMART | ringv_2 | 84 | 128 | IPR011016 | GO:0008270 | |
Cca04g01699 | 131 | Pfam | Ring finger domain | 84 | 128 | IPR001841 | - | |
Cca04g01699 | 131 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 46 | 131 | IPR013083 | - | |
Cca04g01699 | 131 | PANTHER | SI:CH211-59O9.10 | 30 | 131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g01699 | Cca-Chr4 | 28278267 | 28278662 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g01699 | 43 | 128 | C3H Transcription Factor Family | AT1G14200 | 36.957 | 2.36e-12 | 59.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g01699 | - | K22378 | pvu:PHAVU_007G098000g | 87.4261 |