Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01673 ATGGTTCCTCAACACGATGATCTTTTGGAGCGTGTCGGCGGCGATGAAGCGCAAGTTCATTTGGTAGGGGTTGTTGGAGGCGATGAAGTGGAAGGAGACGAGAGGGACCGTGAACAGGGCCACGAAACGGTCAGAGTTTGTAGGGAGAAGACAAGTGGACATGTATATGCAATGAAGAAGCTTAAAAAATCAGAGATGCTTCATAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTTGTAGAGGTTGAGAGCAATTGCATTGTCAAACTTTATTGTTCTTTTCAGGATGATGAATATTTGTATCTTATTATGGAGTACCTACCGGGTGGGGATATGATGATTCTACTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTAGGAGAAACAATTCTGGCCATCGAATCTATACATAAACATAATTATATACATAGGTATTTACATGTTCATTTACTTTCAGAGTAG 486 0.4095 MVPQHDDLLERVGGDEAQVHLVGVVGGDEVEGDERDREQGHETVRVCREKTSGHVYAMKKLKKSEMLHRGQVEHVKAERNLLVEVESNCIVKLYCSFQDDEYLYLIMEYLPGGDMMILLMRKDTLTEDEARFYVGETILAIESIHKHNYIHRYLHVHLLSE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01673 161 ProSiteProfiles Protein kinase domain profile. 30 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01673 161 SMART serkin_6 37 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01673 161 SUPERFAMILY Protein kinase-like (PK-like) 43 154 IPR011009 -
Cca04g01673 161 Gene3D Transferase(Phosphotransferase) domain 1 114 153 - -
Cca04g01673 161 Pfam Protein kinase domain 43 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01673 161 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 44 152 - -
Cca04g01673 161 Gene3D Phosphorylase Kinase; domain 1 43 113 - -
Cca04g01673 161 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01673 Cca-Chr4 27114017 27114994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01673 44 152 AGC Kinase Gene Family AT3G23310 91.743 4.60e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Cca04g01673 Pkinase 9.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01673 K08790 - cann:124893794 214.157