Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01665 ATGGCACACATCAACCTTCTTTTCATAGTCACTTTCCTTTCTATCTTTTCATGTCTTGCACTGGTTGAGCCATCTTTGGCTCGGAACCAAAACCAAACAATGGCTTACATAAAGTCCTCTTGCCAAGGAACCCGGTACCCTGATCTGTGCATACGTTGCCTAGCCAGGTTTGCCAAATTCACCATAGATGGTCCTCAGGACTTAGCCCATGTTGCACTCTCGGTGAGCCTCTCTAGAGCACTGAAAACAAGGAGCTACTTGTTAAAAGTGGCCAAGGAACTTGAGGAATTCAAGGGTAATAGGGTGTTCCTTATTGTGCAAGATTGTTCCATGCAAATGAGTGATAGTGTAGACCAACTTTACCAAGCCATCAAAGAACTCCGCAAATTGAACAAACGCACTATCATAGATGACACCTTATTGTGGCACATAAGCAATGTCCAAACATGGGTAAGCACTGCCTTAACTGATGCTAGCTATTGTGTTCAATCGTTCCCTGGTCATAGGATGAGTAAGAGGACTGCTACTATAAAGGTTAAGGCGCAAAATGTTGCTGAACTCACTAGTAATGCACTCAACTTATTTCATAGATATGCTTCTAGGTACCAGGCAGCATCTAGAGCCACCAAGAAACCTTAA 639 0.4335 MAHINLLFIVTFLSIFSCLALVEPSLARNQNQTMAYIKSSCQGTRYPDLCIRCLARFAKFTIDGPQDLAHVALSVSLSRALKTRSYLLKVAKELEEFKGNRVFLIVQDCSMQMSDSVDQLYQAIKELRKLNKRTIIDDTLLWHISNVQTWVSTALTDASYCVQSFPGHRMSKRTATIKVKAQNVAELTSNALNLFHRYASRYQAASRATKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01665 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 202 - -
Cca04g01665 212 CDD PMEI-like_3 39 200 - -
Cca04g01665 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 197 IPR006501 GO:0004857
Cca04g01665 212 Pfam Plant invertase/pectin methylesterase inhibitor 36 194 IPR006501 GO:0004857
Cca04g01665 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 198 IPR035513 -
Cca04g01665 212 PANTHER BNAANNG18590D PROTEIN 2 202 - -
Cca04g01665 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 198 IPR035513 -
Cca04g01665 212 SMART PMEI_2 32 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01665 Cca-Chr4 26500893 26501674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01665 6 195 Carbohydrate Esterase AT3G49220 28.061 7.44e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01665 - - ccaj:109789012 409.838