Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01655 ATGAACTTCCTAGCTAGTAATTCAACAACCACCATGTCAAAATTGTTCTATGTTTGTTGTTGTGTCCTTATTATTTTACCAACCATGGTCTTAGGATATTCTTGTTCATGTGACACAGAAGAGGGTAACAAGAGTAATCCAAGTAAAGTTCTCCTCTACAAACTTGGCTCAATCGCTTCTATACTTTTTGTTGGTGCTCTTGGTGTGAGTCTTCCATTGTTGAGCAAGAAAATCCCAACACTTAACCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCCGCAGGTGTGATCCTTGCCACTGGCTTTGTCCACATACTCCCTGATGCATTTGAGAACTTGACTTCACCTTGCTTGAAAGATAACCCTTGGGGCAAGTTTCCCTTCACTGGCTTTGTTGCCATGTTGGCCTCCATAGGGACCCTTATGGTGGACTCATTTGCCACAGGATTTTACCATAGGCAACACTTTAATCCCTCTAAGCAGGTTCCTACAGTTGATGAGGAAATGGGGGATGATCATGCTGGTCACATACATGTTCATACACATGCCACACATGGCCATGCTCATGGACCATCAACTCTCTCCTCTGAAGGCTCAATAACACCTGAAGTACTTAGGCAACGGATCATATCACAAGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCATTGGGAACTACAGAGAGCATTGATACCATAAAGCCACTTCTAATGGCCCTTTCTTTTCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATCTCTCAGATTTATATTATGACAGGCAAAGTTTGA 819 0.4249 MNFLASNSTTTMSKLFYVCCCVLIILPTMVLGYSCSCDTEEGNKSNPSKVLLYKLGSIASILFVGALGVSLPLLSKKIPTLNPKNDIFFMVKAFAAGVILATGFVHILPDAFENLTSPCLKDNPWGKFPFTGFVAMLASIGTLMVDSFATGFYHRQHFNPSKQVPTVDEEMGDDHAGHIHVHTHATHGHAHGPSTLSSEGSITPEVLRQRIISQVLEIGIVVHSVIIGISLGTTESIDTIKPLLMALSFHQFFEGMGLGGCISQIYIMTGKV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01655 272 PANTHER ZINC/IRON TRANSPORTER 19 265 - -
Cca04g01655 272 PANTHER METAL TRANSPORT PROTEIN 19 265 - -
Cca04g01655 272 Pfam ZIP Zinc transporter 52 265 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca04g01655 272 TIGRFAM zip: ZIP zinc/iron transport family 37 267 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01655 Cca-Chr4 26158076 26176398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01655 8 263 Inorganic Solute Cotransporters AT3G12750 61.538 3.10e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01655 K14709 - gmx:100805124 392.889