Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01654 ATGGTCTTAGGATATTCTTGTTCATGTGACACAGAAGAGGGTAACAAGAGTAATCCAAGTAAAGTTCTCCTCTACAAACTTGGCTCAATCGCTTCTATACTTTTTGTTGGTGCTCTTGGTGTGAGTCTTCCATTGTTGAGCAAGAAAATCCCAACACTTAACCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCCGCAGGTGTGATCCTTGCCACTGGCTTTGTCCACATACTCCCTGATGCATTTGAGAACTTGACTTCACCTTGCTTGAAAGATAACCCTTGGGGCAAGTTTCCCTTCACTGGCTTTGTTGCCATGTTGGCCTCCATAGGGACCCTTATGGTGGACTCATTTGCCACAGGATTTTACCATAGGCAACACTTTAATCCCTCTAAGCAGGTTCCTACAGTTGATGAGGAAATGGGGGATGATCATGCTGGTCACATACATGTTCATACACATGCCACACATGGCCATGCTCATGGACCATCAACTCTCTCCTCTGAAGGCTCAATAACACCTGAAGTACTTAGGCAACGGATCATATCACAAGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCATTGGGAACTACAGAGAGCATTGATACCATAAAGCCACTTCTAATGGCCCTTTCTTTTCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATCTCTCAGGTATTGCAATTTTGTTTGTATAGTGTCATGAATCTTACATATATGTTGAGTACAAAAAGTTAA 771 0.4267 MVLGYSCSCDTEEGNKSNPSKVLLYKLGSIASILFVGALGVSLPLLSKKIPTLNPKNDIFFMVKAFAAGVILATGFVHILPDAFENLTSPCLKDNPWGKFPFTGFVAMLASIGTLMVDSFATGFYHRQHFNPSKQVPTVDEEMGDDHAGHIHVHTHATHGHAHGPSTLSSEGSITPEVLRQRIISQVLEIGIVVHSVIIGISLGTTESIDTIKPLLMALSFHQFFEGMGLGGCISQVLQFCLYSVMNLTYMLSTKS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01654 256 PANTHER METAL TRANSPORT PROTEIN 4 246 - -
Cca04g01654 256 PANTHER ZINC/IRON TRANSPORTER 4 246 - -
Cca04g01654 256 Pfam ZIP Zinc transporter 24 236 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca04g01654 256 TIGRFAM zip: ZIP zinc/iron transport family 9 250 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01654 Cca-Chr4 26154934 26155917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01654 7 235 Inorganic Solute Cotransporters AT3G12750 64.224 5.18e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01654 K14709 - gmx:100794874 373.244