Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01653 ATGGCCCTTTCTTTTCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATCTCTCAGGCAAAGTTTGAGTCAAAGTCTATGGCAATTATGGCAACATTTTTCTCCCTAACAACTCCAATTGGGATAATAATTGGAATGGGAGTGTCAAGTGTGTACAAGGAGAATAGTCCAATTGCTTTGGCTGTTGAAGGGGTTTTCAATTCTGCTTCTGCTGGGATATTGATCTACATGGCATTAGTGGATCTGCTAGCAGCAGATTTTATGAACCCGAGGTTGCAGAACAATATGAAGCTTCAATTAGGGGCAAATATCTCTCTTCTTTTAGGTGCAGGTTGCATGTCTTTATTGGCCAAATGGGCTTAA 366 0.4153 MALSFHQFFEGMGLGGCISQAKFESKSMAIMATFFSLTTPIGIIIGMGVSSVYKENSPIALAVEGVFNSASAGILIYMALVDLLAADFMNPRLQNNMKLQLGANISLLLGAGCMSLLAKWA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01653 121 PANTHER ZINC/IRON TRANSPORTER 2 121 - -
Cca04g01653 121 PANTHER METAL TRANSPORT PROTEIN 2 121 - -
Cca04g01653 121 Pfam ZIP Zinc transporter 1 118 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01653 Cca-Chr4 26153585 26154600 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01653 1 121 Inorganic Solute Cotransporters AT2G32270 66.942 9.09e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01653 K14709 - ccaj:109789488 228.409