Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01635 ATGGAGTCACTGACGTGGACACTGTTTGTAGTGTTGACAGTAGCCACCGTGGTGGTGGTCCTTGGAAGCAGGAAAAAGAAGAGTAAATCAAGTAAAAAGCTTCCACCGGGACCCAGAGGTGTTCCGGTGATCGGAAACCTTCTGGAGCTGGGAAAGAAGCCGCACCACTCGCTGGCGAGGCTTTCGGAGGCCCACGGGCCTATAATGAGGCTGCAGTTGGGGCGAGTGACGACGGTGGTGATATCTTCATGCGAGATGGCCCGAGAAGTGCTCCAAACGCACGACCTCTTGCTCTCCAACAGAACCGTTCCCGATGCCTTGTCGGTGCTAAACCACAACCAGTATAGCTTGTCCTTCATGCGCGTCTCACCACGCTGGCGCGACCTCAGAAAGATTTGCAATAACCAATTGTTCGCAAACAAGACGCTTGAGGCCAGCCAGGACCTCAGGCGCAACAAGTTGCAGGTACTGACTTATCTTACCACAAAAACAACAGTGAACTTGCTGTCGAACACGTTCTTCTCTGTGGATTTCGTGCACTCCGCAGAGGAGGCAGGAGAGTACAAGGAGATCGTCGTCAGCATTCTCAAGGAGGTTGGGGCGCCCAACGTCTCCGACTTCTTCCCCGCCTTGAGGTTCCTCGACTTGCAGGGCATCAGGCGCCGCTCCGTCGTCTCCGTCAAGAAGGTCCTCACCATCTTCCGCCGCTTCGTCGCCCAGAGGATGGCCACCAGAGAAGGCACCGGCTCTAACAACAACGACGATCTGCTCGATGCTTTGCTTAATATTTCTCAGGACAATGGCAAGATAGAGATGGACAAGGATGAGATTGAACACTTGTTGATGAACATCTTTGTCGCAGGGACCGACACAACAACATACACACTAGAATGGGCCATGGCGGAGCTACTTCACAATCCAAAGATGATGTCAAAAGTCCAGAAGGAGCTAGAGGAAGTAGTTGGGAAAGGAAAGGCAGTAGAAGAAACAGACATTGGAAAGTTACCATACTTGGAAGCAGTGATAAAAGAGACGTTCCGCGTGCACCCTCCAGTGCCACTTCTACTCCCGCGCAAGGCCGAAAGCGACGTGGAAATCGGAGGGTACACGATCCCAAAGGACGCGCAGGTGCTGGTGAACGCGTGGGTGATCGGAAGAGACCCGAAGAAGTGGAAGAACCCGAGCGTGTTTGCGCCAGAGAGGTTCTTGGAGATGGAGAGTGAAATCGACGTTAAGGGACACCACTTTGAGCTGATACCGTTTGGGTCTGGGCGAAGGATTTGCCCTGGGTTGCCTCTGGCTAGTAGGATGTTGCCGTTGATGTTGGGGTCGTTGCTGAATTGCTTTGGGTGGAGAGTTGAAGAGGGGATGAAGCTGGATGAGTTGGACAAGGAAGACGAGTATGGGATCACGTTGGAAAAGTCTCAGCCAGTTAGGATTGTTCCAGTCAAGTTGAGTGATTGA 1464 0.5273 MESLTWTLFVVLTVATVVVVLGSRKKKSKSSKKLPPGPRGVPVIGNLLELGKKPHHSLARLSEAHGPIMRLQLGRVTTVVISSCEMAREVLQTHDLLLSNRTVPDALSVLNHNQYSLSFMRVSPRWRDLRKICNNQLFANKTLEASQDLRRNKLQVLTYLTTKTTVNLLSNTFFSVDFVHSAEEAGEYKEIVVSILKEVGAPNVSDFFPALRFLDLQGIRRRSVVSVKKVLTIFRRFVAQRMATREGTGSNNNDDLLDALLNISQDNGKIEMDKDEIEHLLMNIFVAGTDTTTYTLEWAMAELLHNPKMMSKVQKELEEVVGKGKAVEETDIGKLPYLEAVIKETFRVHPPVPLLLPRKAESDVEIGGYTIPKDAQVLVNAWVIGRDPKKWKNPSVFAPERFLEMESEIDVKGHHFELIPFGSGRRICPGLPLASRMLPLMLGSLLNCFGWRVEEGMKLDELDKEDEYGITLEKSQPVRIVPVKLSD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01635 487 SUPERFAMILY Cytochrome P450 32 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 486 - -
Cca04g01635 487 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 Pfam Cytochrome P450 35 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Cca04g01635 487 Gene3D Cytochrome P450 19 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01635 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01635 Cca-Chr4 25391113 25393973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01635 8 484 Cytochrome P450 AT2G45550 43.775 1.15e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01635 - K23810 gmx:100807367 543.502