Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01627 ATGCTCGCGAAGTCGCTTGTGGTCGACGGCAGCACGAAGTCACACAAAATGGCGCTGGTTTTCATCCACAACGGGTTGAATTCGTTGAAGTCGCCAATGGTGGTGCAACAGTTCGTGAACCACGATGGTGTGATCTTCAAGGTCTACGTGGTCGGGGAGTGCGTGCGTTGCGTGAAGCGAAAGTCCTTGCCGAATGTGGAAGAGAAGAAGTTGGTAAGGGTTTCGGAGGACTTGTTGTCATTCTCGCAAGTGTCAAATTTGACCACCGATGAGAGAATCGATGATAGGTATTATAAGATGATGCAGTTGGATGATATCGAAATGCCTCCCCTGAGCTTCGTTACTCAGATAGCTCGAGGAGATACCCATTCTAACATATTGGAAGAAAGTTTGAAAAGCTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAATGGGAGAGTCTGTGATCAGATATTTGAAGGATTTGACACACTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAACATTTCCATGCTGCTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATTGATATGCTCTTTAAAGGCAGAGCTTGCACCAAAATAA 609 0.4417 MLAKSLVVDGSTKSHKMALVFIHNGLNSLKSPMVVQQFVNHDGVIFKVYVVGECVRCVKRKSLPNVEEKKLVRVSEDLLSFSQVSNLTTDERIDDRYYKMMQLDDIEMPPLSFVTQIARGDTHSNILEESLKSLELRNSTKMMFKSYNGRVCDQIFEGFDTLSDQCFAEVTTNNISMLLSFGEAIAKSKRLICSLKAELAPK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01627 202 Gene3D - 1 124 - -
Cca04g01627 202 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 123 - -
Cca04g01627 202 SUPERFAMILY Cullin repeat-like 121 193 IPR016159 -
Cca04g01627 202 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 1 119 IPR040464 -
Cca04g01627 202 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 123 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01627 Cca-Chr4 25204970 25206106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01627 116 190 EXO70 exocyst subunit family AT5G03540 47.059 4.07e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01627 K00913 - ccaj:109789666 209.534