Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01597 ATGATGGACCCCAAAACCCCATTTGAGGATTCTTCCAATTTTGATTCTTTCATGTTCAATTCATCGTCACGTAGAAGTGGCGTGGCCGCTCAGTCTAGGAGCAACTCCATCCAGGAAGTGGGTTTTGGCCACTCAGGATCCACGCGTGTGAGGTATGGGTCAAAGGGTGTTGATTCTGAAGCCCTCAGCATGTCTCAGAAGGAAATCAGTGATGAGGATGCAAGGTTGGTTTATGTTGATGATCCTGAGAGGACCAATGAAAGGCTTGAATTTGCAGGGAATTCAATCCGAACTGCCAAGTACTCCATCATCACCTTTCTTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTACTTCCTTGTGATTGCGGTTCTCAATCAGCTCCCTCAGCTAGCTGTTTTTGGAAGGGGTGTTTCCATTTTGCCATTGGCCATTGTGCTGCTTGTCACTGCTGTGAAGGATGCATATGAAGATTGGAGGAGGCACAATTCAGACAAAATTGAGAACAACAGGTTAGCATGGGTTTTGGTTAATGGTGTGTTTCAACAGAAGAAGTGGAAGGATGTTAGAGTTGGGGAGGTTATTAAAATCAGTGCAAATGAAACCATTCCTTGTGATATTGTGTTGCTCTCAACTAGTGACCCTACCGGGGTTGCTTATGTGCAGACTATTAATCTTGATGGAGAGTCTAATTTGAAGACTAGGTATGCAAAGCAAGAGACTCAATCTAAGTTGCCTGAAAAGGAGATGTTGAATGGGTTGATTAAGTGTGAGAAACCCAACAGGAACATATATGGGTTTCAGGGTAATATGGAAGTTGATGGAAAGAGGTTGTCTCTTGGATCCTCCAACATTGTCCTTAGAGGCTGTGAGCTCAAGAATACTAATTGGGCACATGGTGTTGCTGTGTATTGTGGTTGTGAAACTAAAGCTATGCTCAACAGCTCAGGAGCTCCATCGAAAAGGAGCCTTCTTGAGACTCGCATGAACTCTGAGATCATCATGCTTTCTTTATTTCTTGTAGTTTTGTGTACAGTCTCCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGGTGAGTTGAATCTCTTGCCGTATTACAGGAAACTGGATGTTTCAAAGGGGGTAGAGGACAGCTATAAGTATTATGGATGGGGATTGGAAATCCTTTTTACTTTCCTTATGGCAGTTATAGTGTACCAGGTCATGATCCCTATATCCTTGTACATTTCCATGGAGCTTGTCCGTGTGGGTCAGGCATACTTCATGATTGGAGACACCAGAATGTATGATAAGGCAACAAATTCAAGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTAGGTCAAATTAAATATGTCTTTTCCGACAAAACTGGTACACTGACTGAGAACAAGATGGAGTTTCAATGCGCAAGCATCTTGGGGTTTGATTACAGTTCTGCAACAGACAGTCTTGAGAATGAGCAAGTTGAATACTCTGTTCAAGCGGATGGAAAGATCATTAAGCCAAAGATGATGGTGAAAGTTAATCAAGAGCTTTTGCAACTATCAAAAAGTGGATTTGCAAATAAAGAGGGCAAACAAATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAACACAATTGTGCCTCTTCTTGTTGACACATCTGACCCTATGGTCAAGCTGATAGATTACCAAGGGGAATCGCCAGATGAACAATCATTGACTTATGCTGCTGCTGCATATGGTTTTATGCTTATTGAACGAACCTCAGGCCACATAGTCATTGATATTCATGGAGAAAGACAAAGGTTCAATGTCTTAGGTTTGCATGAATTTGATAGTGATCGGAAGAGGATGTCGGTTATATTGGGGTATAACAACAATTCTGTAAAACTCTTTGTTAAAGGGGCAGATACATCCATGCTTAGTGTGATAGACAAATCATTGAACACAGACATACTACAAGCAACTGAAACCCATCTTCACTCTTACTCCTCTGTGGGTCTGAGAACACTTGTTATTGGGATGAGGGACTTGAATGTTTCGGAATTTGAGCAATGGCACTCTGATTTTGAGGCTGCAAGTACTGCTTTGATTGGTAGGGCTGCTATGCTTCGCAAAGTTGCTAGCAATGTAGAGAACAATCTGTGCATATTGGGTGCAACTGCTATCGAAGATAAACTGCAGCAAGGTGTGCCAGAAGCTATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTCCTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGATACTCCTCAAAGCTCCTAACGAGCAATATGACTCAAATTATAATTAATACAAACAATCGAGAGTCATGTAGAAGACGGTTACAAGACGCCCTAGTCATCTCTAGAAATCAAAGGGCTGTGTCTAGAGTTACGCACAATTCTGATGGAAGTTCAGATGCTGTTTCAATTTCAGCTCCATTGGCCTTAATTATCGATGGTACTAGCCTTGTTTATATTCTTGACAGCGAGCTTGAAGAAGAGCTCTTTGATCTTGCAACTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCACTACAGAAGGCTGGGATTGTTGCGCTTGTGAAGAATAGGACGGATGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTATCGATGATCCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGATTTTTAGTTCCTCTCTTATTGATACATGGACATTGGAATTACCAACGATTGGGTTACATGATAATATACAACTTCTACAGAAATGCTATCTTTGTTCTTGTCCTATTTTGGTATGTGCTCTTAACTACCTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTATATTCGATAATCTACACTGCATTGCCAACTATTGTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGAATCCTCAGCTTTATGGAGCCGGACTAAGACACGAGGCCTACAACAAAAAATTGTTTTGGTTGGCAATGGCTGATACATTGTGGCAAAGCATTGCTGTCTTCTTCACTCCCCTAATTGCATATTGGGGAACCACTGTAGATGTAGCAAGCATAGGAGATCTTTGGACTCTTTCAGTTGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAGTTGGATTATTCATGCAGTCATTTGGGGCTCTATTGTTGCGACTTTAATATGTGTCATGATTATCGATGCTATACCTGCCTTCCCTGGTTACTGGGCTATCTTTCATGTTGCAGGAACTGGAGTGTTCTGGTTATGTTTGCTCGGAATTGTGATAGCCGCGTTACTTCCACGATTTGTTGTAAAATATATTTATCAGTATTATTTTCCAAGTGACATTCAGATTTCAAGAGAAGCTGAGAAGTATGGGAATCCAAGAGACAATGGAAGTGGACAAATAGAAATGCTTCCTGTTTCAGATGCTCCACCAAGATAA 3552 0.4144 MMDPKTPFEDSSNFDSFMFNSSSRRSGVAAQSRSNSIQEVGFGHSGSTRVRYGSKGVDSEALSMSQKEISDEDARLVYVDDPERTNERLEFAGNSIRTAKYSIITFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAIVLLVTAVKDAYEDWRRHNSDKIENNRLAWVLVNGVFQQKKWKDVRVGEVIKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETQSKLPEKEMLNGLIKCEKPNRNIYGFQGNMEVDGKRLSLGSSNIVLRGCELKNTNWAHGVAVYCGCETKAMLNSSGAPSKRSLLETRMNSEIIMLSLFLVVLCTVSSVCAAVWLKRHKGELNLLPYYRKLDVSKGVEDSYKYYGWGLEILFTFLMAVIVYQVMIPISLYISMELVRVGQAYFMIGDTRMYDKATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSATDSLENEQVEYSVQADGKIIKPKMMVKVNQELLQLSKSGFANKEGKQIYDFFLALAACNTIVPLLVDTSDPMVKLIDYQGESPDEQSLTYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGYNNNSVKLFVKGADTSMLSVIDKSLNTDILQATETHLHSYSSVGLRTLVIGMRDLNVSEFEQWHSDFEAASTALIGRAAMLRKVASNVENNLCILGATAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINTNNRESCRRRLQDALVISRNQRAVSRVTHNSDGSSDAVSISAPLALIIDGTSLVYILDSELEEELFDLATRCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLLTTFTLTTAINEWSSMLYSIIYTALPTIVVGILDKDLSKRTLLKNPQLYGAGLRHEAYNKKLFWLAMADTLWQSIAVFFTPLIAYWGTTVDVASIGDLWTLSVVILVNLHLAMDVIRWSWIIHAVIWGSIVATLICVMIIDAIPAFPGYWAIFHVAGTGVFWLCLLGIVIAALLPRFVVKYIYQYYFPSDIQISREAEKYGNPRDNGSGQIEMLPVSDAPPR 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01597 1183 MobiDBLite consensus disorder prediction 1162 1183 - -
Cca04g01597 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 13 1183 - -
Cca04g01597 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 467 733 IPR023299 GO:0000166
Cca04g01597 1183 CDD P-type_ATPase_APLT_Dnf-like 93 1042 - -
Cca04g01597 1183 SFLD C1.7: P-type atpase like 445 933 - -
Cca04g01597 1183 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 91 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca04g01597 1183 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 13 1183 - -
Cca04g01597 1183 Gene3D - 717 922 IPR023214 -
Cca04g01597 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Cca04g01597 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 463 469 IPR018303 -
Cca04g01597 1183 SUPERFAMILY Calcium ATPase, transduction domain A 174 315 IPR008250 -
Cca04g01597 1183 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Cca04g01597 1183 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Cca04g01597 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 852 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca04g01597 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 393 482 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca04g01597 1183 SFLD p-type atpase 445 933 IPR044492 -
Cca04g01597 1183 Pfam Cation transport ATPase (P-type) 570 645 - -
Cca04g01597 1183 Pfam Phospholipid-translocating ATPase N-terminal 77 142 IPR032631 -
Cca04g01597 1183 Gene3D - 148 318 - -
Cca04g01597 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 1149 IPR023298 -
Cca04g01597 1183 Gene3D - 561 701 IPR023299 GO:0000166
Cca04g01597 1183 SUPERFAMILY HAD-like 448 923 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01597 Cca-Chr4 24156537 24162768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01597 2 1183 Primary Pumps ATPases AT5G04930 69.146 0.0 1713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01597 K14802 - gmx:100784988 2074.67