Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01578 ATGAAGATGCTCATTCGGAAGATCTCCCGAGTCAGCGACTCACCGCAGTACGCGCTGCTCCGATCCGAGTCGACTCGGCGGAAGAGGCAGCACGTGGGGGTGCCGGTGGGGCACGTGCCGGTCTACGTGGGCGAGGAGATGGAGCGGTTCGTGGTGAGCGCGGAGCTACTGAACCACCCGGTTTTCGTGAACCTGCTGAAAGTACGGTTACCAGCAGAAGGGGGTGCTAAGAATACCCTGCCACGTCATCGTCTTCGAACGAGTCCTCCAAGCGATTCGACTCGGCCGCGACTCGCTCCAAGACATCCACCACCTACTAATCACTACTTCCTCTTCATCCCAAGACTTTTGCTAGATTTTTTTTTTCTCTTTCTGTAA 378 0.5608 MKMLIRKISRVSDSPQYALLRSESTRRKRQHVGVPVGHVPVYVGEEMERFVVSAELLNHPVFVNLLKVRLPAEGGAKNTLPRHRLRTSPPSDSTRPRLAPRHPPPTNHYFLFIPRLLLDFFFLFL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01578 125 Pfam Auxin responsive protein 21 67 IPR003676 GO:0009733
Cca04g01578 125 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 3 67 - -
Cca04g01578 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 67 IPR003676 GO:0009733
Cca04g01578 125 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01578 Cca-Chr4 23431932 23432615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01578 27 66 Calmodulin-binding Proteins AT4G34750 46.939 4.42e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01578 K14488 - lja:Lj3g3v0424090.1 99.3673