Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01566 ATGGAGGTAGTATGGGTGGTGACTCTGATCGCAGCGGTGATTTCCTTGTGGGCACTGCACAAGCTCAACTCGCTCTGGCTTCGGCCTAAGCGGTTGGAACGCTTTCTAAGAGCGCAAGGTCTTCAGGGTTACCCATACTCCCTTTCACAACCCCATGTGCAATTAAATGAGCCCAAACCCCAACCTTTTGCTCTCTCCAACGATGTGGCGCCTCGTCTATCCTCGCTCCTCTATAACACTATCTCCAAATATGGCAAGAATTCCTTTATATGGGAAGGTACAACACCAAAGGTGGTCATTTCGGATCCAAAACAAATCAAACAAGTCTTTAACAACATGTATGACTTTCAGAAACCAAAGTTAAGTGGCATTGCCAAGTTCTTCATCAATGGTTTAGTAAAGTATGAGGGTGAGCAGTGGGATAAACATCGAAGGATTATCAACCCAGCATTCCACTTGGAAAAATTGAAAAATATGCTGCCAGCATTTTCTCTAAGCTGCCATGATATGATTAGCGTGTGGAAGGGAATGTTGTCCTCAGATGGAACATGCGAGATTGATGTTTGGCCTTTCCTTCAGAATTTGAGCTGTGACATAATTTCCAGAACAGCATTTGGAAGCAGCTATGCAGAAGGAACGAAAATATTTCAACTTCTAAAAATGCAGGGGTATCTATACATGACAGCTAAGTACGAATACATACCAATATTGCGGAATCTACCAACATCTACCAACAAGAAGATGAACGCAATTGAAAGAGACATGCATGATTCAATTGAGGGTATCATCAAAAAACGAGAGAAAGCCTTGGAGAATGGTGAAACCTCCGATGCAGATTTATTAAGCATACTTTTGGAATCAAATCGCAAGGAAATCAAGGGACATGGAAACAGTAGGAGTGTTGGAATGACCAAACAAGAGGTTATTGAGGAATGCAAAACATTCTACTTGGCAGGGCAAGAGACCACTTCAACTCTGCTGGTTTGGACAATGATCTTATTGGGTAGGTTTCCTGAATGGCAAGCAAAAGCAAGGCAAGAGGTTCTTCAAGTATTTGGAAACCAAAATCCAAACTTTGAAGGGTTAAGTCAGCTTAAAATTGTTACCATGATTCTATATGAGGTTCTAAGGTTATACCCTCCAGCAATTTTCTTTAGTCGCACTCTTCAAAAGGACATGAAAGTTGGAAACCTGTCACTACCCGCAGGAGTACACGTTACCATGCCAATATCTTTGATTCACCTTGATGCTGATATATGGGGTGATGATTCAAAGGAGTTTAAACCTGAAAGATTCTCTGAAGGAATTGCTAATGTCACCAAAGGCCAAGTTTCATTTTTCCCATTTGGATGGGGTCCAAGAATATGTATTGGCCAAAACTTTGCCTTATTGGAAGCCAAGATAGTGTTGTCATTGCTTCTACAAAATTTCTTGTTTGAGCTTTCTCCGTCCTATGCTCATGCTCCAACAATTATGCTCACTTTGCAACCAAAACATGGGGCACACATTGTTTTGCATCAACTATAA 1527 0.4139 MEVVWVVTLIAAVISLWALHKLNSLWLRPKRLERFLRAQGLQGYPYSLSQPHVQLNEPKPQPFALSNDVAPRLSSLLYNTISKYGKNSFIWEGTTPKVVISDPKQIKQVFNNMYDFQKPKLSGIAKFFINGLVKYEGEQWDKHRRIINPAFHLEKLKNMLPAFSLSCHDMISVWKGMLSSDGTCEIDVWPFLQNLSCDIISRTAFGSSYAEGTKIFQLLKMQGYLYMTAKYEYIPILRNLPTSTNKKMNAIERDMHDSIEGIIKKREKALENGETSDADLLSILLESNRKEIKGHGNSRSVGMTKQEVIEECKTFYLAGQETTSTLLVWTMILLGRFPEWQAKARQEVLQVFGNQNPNFEGLSQLKIVTMILYEVLRLYPPAIFFSRTLQKDMKVGNLSLPAGVHVTMPISLIHLDADIWGDDSKEFKPERFSEGIANVTKGQVSFFPFGWGPRICIGQNFALLEAKIVLSLLLQNFLFELSPSYAHAPTIMLTLQPKHGAHIVLHQL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01566 508 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 504 - -
Cca04g01566 508 Gene3D Cytochrome P450 52 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 SUPERFAMILY Cytochrome P450 72 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cca04g01566 508 Pfam Cytochrome P450 81 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 10 504 - -
Cca04g01566 508 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01566 508 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01566 Cca-Chr4 22925421 22928675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01566 6 508 Cytochrome P450 AT3G14690 48.824 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01566 - K17873 gmx:100790445 779.63