Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01548 ATGACCAAACAAGAGGTTATTGAGGAATGCAAAACATTCTACTTGGCAGGGCAAGAGACCACTTCAACTCTGCTGGTTTGGACAATGATCTTATTGGGTAGGTTTCCTGAATGGCAAGCAAAAGCAAGGCAAGAGGTTCTTCAAGTATTTGGAAATCAAAATCCAAATTTTGAAGGGTTAAGTCAGCTTAAAATTGTTACTATGATTCTATATGAGGTTCTAAGGTTATACCCTCCAGCAATTTTCTTTAGTCGCACTCTTCAAAAGGACATGAAACTTGAAAACCTATCACTACCTGCAGGAGTAAACATTACCATGCCAATATTTTTGATTCACCTTGATGCTGACATCTGGGGTGATGATGCCAAGGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCTAAGGTCACAAAAGGCCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGTATTGGCCAAAACTTTGCCTTATTGGAAGTCAAGATAGGGTTATCATTGCTTCTGCAAAATTTCTCATTTGAGCTTTCTCCATCCTATGCTCATGCTCCAACGATTATTCTCACTTTGCAGCCAAAACACGGGGCACACATTGTTTTGCATCAACTATAA 621 0.3945 MTKQEVIEECKTFYLAGQETTSTLLVWTMILLGRFPEWQAKARQEVLQVFGNQNPNFEGLSQLKIVTMILYEVLRLYPPAIFFSRTLQKDMKLENLSLPAGVNITMPIFLIHLDADIWGDDAKEFKPERFSEGIAKVTKGQVSFFPFGWGPRICIGQNFALLEVKIGLSLLLQNFSFELSPSYAHAPTIILTLQPKHGAHIVLHQL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01548 206 SUPERFAMILY Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PANTHER CYTOCHROME P450 72A11-RELATED 1 197 - -
Cca04g01548 206 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 197 - -
Cca04g01548 206 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 147 156 IPR017972 GO:0005506|GO:0016705
Cca04g01548 206 Pfam Cytochrome P450 1 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01548 206 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01548 Cca-Chr4 22462541 22463534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01548 1 206 Cytochrome P450 AT3G14680 64.078 2.00e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01548 - K17873 ccaj:109799024 417.542