Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01530 ATGTTTGCACAAAAGAATGCAGAGGAAAAATTTAAACGGGGAGACTTAAAAGGAGCCATCATTTGTGCCACCATGGCCAAAACCCTAGACTCCAATATAGATGGCATTGATGAAACTCTTTTTGCCTACAAAATCCACCTCGCTGCTTCGACAAAACATGGCAAAGGTCAAGGTCGATTCAAAGATCTCACTTATCTTTGGACCCACCCTAACAACGGTACAACAAATTGGAAGCAATTTCTTGGCATTGGGGAAGGCTTTGATGACATTGAGAGCATCAAGAATCAATGCGACAAATTGGTAGAGATGGTTAACCCAACAAAGAACGCTTCCGTAGCAACTTTGGGTGCTCTTAGACTCATTTACAAAGCTCGGTGTGACCTATGTAACCCAAATAATCAAAAATTGGTTCTTTCAAATCAACAAATACATGGCATCAAAGTTACCAAAAAGGCATGTCCTCGGTGCAGAAAGTGGTGCAAGTTCTATGTTCCTACGGTTTCAAGTGCACCCAAACATGGAGAAAATTGCCTTAAAACGAAAACTGTTTTAATCACGTGCTCCGCTTGCAGATTCCAGTTCGATCCCACACCTGACATTGACAAGACTCCAAAGTCAAGAAATGAAGCACCAGATGATGTTTACATTATAGTGTCTAGAGAAGTGGAGATAATCAGTAACGTAATGGAGAAAGAGAGAATTGTAGGGAATTTACATACTGAGGATATGTTTGGAGAGGTTGGTCCACTTTGTTGTAGACCTCAAAGCTTTACCTATAGAACCAAGACTCTCACACAACTCCTGAGACTGAAGACCAATACTCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAACATACAAATACGCAAAAATTTCCTTGAGCATTTCAAGCAGCTCAAGGATCTGAGTATCAGAGATTTGATGGTGGAGAATGTGGAAGAAGAGGACCCTAACAAGTTCACATCCATGTTAGGGTCCTCTTCTTCCACATTCTCCACCATCAAATCTCTGATACTCAGATCCTTGAGCTGCTTGAAATGCTGCATTTGCATCACTTCTATTATGTTTAAGAGTTAA 1080 0.4037 MFAQKNAEEKFKRGDLKGAIICATMAKTLDSNIDGIDETLFAYKIHLAASTKHGKGQGRFKDLTYLWTHPNNGTTNWKQFLGIGEGFDDIESIKNQCDKLVEMVNPTKNASVATLGALRLIYKARCDLCNPNNQKLVLSNQQIHGIKVTKKACPRCRKWCKFYVPTVSSAPKHGENCLKTKTVLITCSACRFQFDPTPDIDKTPKSRNEAPDDVYIIVSREVEIISNVMEKERIVGNLHTEDMFGEVGPLCCRPQSFTYRTKTLTQLLRLKTNTLIEAMQIKKEDNIQIRKNFLEHFKQLKDLSIRDLMVENVEEEDPNKFTSMLGSSSSTFSTIKSLILRSLSCLKCCICITSIMFKS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01530 359 ProSiteProfiles cAMP/cGMP binding motif profile. 207 296 IPR000595 -
Cca04g01530 359 PANTHER POTASSIUM CHANNEL AKT2/3 207 337 - -
Cca04g01530 359 CDD CAP_ED 208 280 IPR000595 -
Cca04g01530 359 Coils Coil 355 359 - -
Cca04g01530 359 PANTHER POTASSIUM CHANNEL AKT1 207 337 IPR045319 GO:0005249|GO:0006813
Cca04g01530 359 Gene3D Jelly Rolls 206 320 IPR014710 -
Cca04g01530 359 Pfam Cyclic nucleotide-binding domain 207 280 IPR000595 -
Cca04g01530 359 SUPERFAMILY cAMP-binding domain-like 208 300 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01530 Cca-Chr4 21932371 21936930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01530 207 326 Ion Channels AT4G22200 56.452 5.68e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01530 K21867 - gmx:100798422 179.104