Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01495 ATGAGTTTGAAGACGAAGGTGGCTGGGGACGCTGGAGATACGGAGGATCCATTGCCTAGTGATGTTCAGATTTTGCTCACTTCCAAGGAGGATTCGGTGTCGATGAGATCGCTCGGGGCTCAATATATATCGAAGCTTGTTAAAATTTTTGGGATTACTATTGCTGCATCCAGGACTAAGGCAAAGGCTACTTATGTTACTCTGGTGTGTAAGAATTGTAAGAAGGGGAAGCAGGTTCCATGCCGGCTGGGACTTGGGGGAGCAATTGTTCCTCAGTCTTGCGATCATGTTCCTCAGGTTTAG 303 0.4719 MSLKTKVAGDAGDTEDPLPSDVQILLTSKEDSVSMRSLGAQYISKLVKIFGITIAASRTKAKATYVTLVCKNCKKGKQVPCRLGLGGAIVPQSCDHVPQV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01495 100 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 62 74 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cca04g01495 100 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 36 51 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cca04g01495 100 SUPERFAMILY Nucleic acid-binding proteins 19 96 IPR012340 -
Cca04g01495 100 Gene3D - 62 95 - -
Cca04g01495 100 Pfam MCM OB domain 35 95 IPR033762 -
Cca04g01495 100 Gene3D - 35 61 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01495 Cca-Chr4 20998018 20998487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01495 3 99 Core DNA Replication Machinery Family AT2G07690 72.165 9.13e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01495 K02209 - gmx:100779483 175.637