Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01445 ATGGCTGACATTGAAGGTCTGGCTGAGGCTGCAGGGGCCAGGTTTAGTTCATTGGAGCTCATTGGACAGGGATCATTCGGCGACGTGTATAAAGGGTTCGATAAAGAGCTCAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTCCAATCAGGTCCCCCACTCGATGAAATGTCAATTGCTTGCATTTTACGTGATTTACTTCATGCGGTTGATTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACGGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTCTCTGCACAGTTAACAAGAACTATATCAAGGAGAAAGACATTTGTAGGAACCCCATTCTGGATGGCACCTGAGGTTATCCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTCTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCACCACAACTGGATGAACATTTTTCTCGTTATATGAAAGAATTTGTTTCGTTGTGTTTGAAGAAGAGACCCAGTGCTAAGGAGCTTCTTAAACAGCGGTTCATTCGGAACGCTAGGAAGAGTCCAAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAATTCCAAATAAAAGATGATCAAGAGGCACCTATAAATGCGCCAAGGGGGATGGGGGATGCATCTGATACTATTAAGGCTGCAAGAGATTTAAGGAGTGATGAAACTAATCAGCCTAGTGGTCAAGGTAAATCCCTAAAAAATTCTGGCTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAGTTTAGAGATAAGAAATCTGAAGTTTTGAATCATCAGCTTAACCAAAGAAAAGGTCCAGAGAGTGGCTATCAAGGGGGATCTGCCAATAAAAGTGCACTTAATGAGTCACAAGAAACTTCTTTTGGAAAAGATCTTGGAGTTCCCTACCATGATGAACATCCAGATAATCACCTTGAAGATCAGGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGGTCTCCAAAAGGACCACAGCAATCACTGTTTCGTGACCAAAGTTCCCGGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACTAGCGGGACTGTTGTTTTGCGTAACCAGTATGATGATAGCGATTCTCCACAGACACCAAGGTCCAGACTGGGACTTAATAGCAGAAATTCAAATGCTTCACTGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCGGCTATCCAAGGTGGATTAAGGAAAGTGAGTGCCCGGGAGAGATTTGCCCTGGGAAAGCTCAACAACGATGTACAGGAAAACAGGAGAGATCAATTGTCAAGCAGTCCTGGTTCTTCCAGACCATCCCGTGAATATATAGATGCACAGAAGGGAATTTCAAGATCACATTCTGCTAGTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGTGCCATTGTCTGGTTTGCTTATTCCTTCATTAAAAGAGGCGATTGCTGATGATCCAGAAGGGTCAATTGTGCAAATTGTTATAGATGCTCTTGTGAACATGGAGGGGACAAAGCCTCGATCTTGTGATGCACTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAAGAAACTTCATTAAAGGACATGCAAGAACTGGCTGGCCAAATATTCAGAAACTCCAAGTCAGCTGAAGAAACACGAAATGCCGAAGCTGATAACAAGAAGAAACAAAACAAGGAACTTCATTCAAACAGCAATTTAAGCCCTCTCGCGAGATTTCTTCTCTCAAGATGGCAAGGCCAAACATCGCGGGATCTAAGTCCTGCTTGA 2094 0.4241 MADIEGLAEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAVDYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKRPSAKELLKQRFIRNARKSPKLLERIRERPKFQIKDDQEAPINAPRGMGDASDTIKAARDLRSDETNQPSGQGKSLKNSGWDFSIGGSQGTGTFRSVSRPPQFRDKKSEVLNHQLNQRKGPESGYQGGSANKSALNESQETSFGKDLGVPYHDEHPDNHLEDQDELSGNGSGTVVIRSPKGPQQSLFRDQSSRSSSSYASFEDVSTSGTVVLRNQYDDSDSPQTPRSRLGLNSRNSNASLEDSATNLAEAKAAIQGGLRKVSARERFALGKLNNDVQENRRDQLSSSPGSSRPSREYIDAQKGISRSHSASDDEESAKIISSSVPLSGLLIPSLKEAIADDPEGSIVQIVIDALVNMEGTKPRSCDALVKKLLQRLASSKETSLKDMQELAGQIFRNSKSAEETRNAEADNKKKQNKELHSNSNLSPLARFLLSRWQGQTSRDLSPA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01445 697 MobiDBLite consensus disorder prediction 314 348 - -
Cca04g01445 697 Pfam Protein kinase domain 16 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01445 697 MobiDBLite consensus disorder prediction 549 565 - -
Cca04g01445 697 CDD STKc_MST3_like 14 283 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 651 669 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 645 673 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 397 414 - -
Cca04g01445 697 SMART serkin_6 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01445 697 ProSiteProfiles Protein kinase domain profile. 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01445 697 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 695 - -
Cca04g01445 697 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 695 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 522 568 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 274 492 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 415 492 - -
Cca04g01445 697 Gene3D Transferase(Phosphotransferase) domain 1 12 295 - -
Cca04g01445 697 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cca04g01445 697 SUPERFAMILY Protein kinase-like (PK-like) 14 285 IPR011009 -
Cca04g01445 697 MobiDBLite consensus disorder prediction 364 393 - -
Cca04g01445 697 Coils Coil 41 68 - -
Cca04g01445 697 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01445 Cca-Chr4 19666822 19676241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01445 1 694 MAP Kinase Kinase Kinase Kinase AT3G15220 64.957 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Cca04g01445 Pkinase 2.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01445 K08838 - gmx:100786501 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01445 04 19666822 19676241 Cca04g01445 04 19666822 19676241 ECH