Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01442 ATGACGGGCAAAGAAATTTTCCATAAGATGAAGGAAAAGGTTTTGGGTTTATCTGATGCTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACACATGGCTTTCACTTGGTAAAGGGAAGAGCAGGTCATGCCATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTTGATAACAATGAGTTGGGTTTATTTGCAATATTTGATGGTCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGATGCTGTCATGAGAGCATATCGTAAAACTGATTCTACTATTTTAGAAAAATCAGGTGAACTAGGTAGAGGAGGTTCAACTGCAGTTACAGCAATATTGATCAACTGTCAGGAGCTAGTGGTGGCCAATATTGGGGATTCTCGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTATCAGTGGATCATGAACCAAGCGTAGAAAGTGAGGATATAAAAAATAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTTCCACGTGTTGATGGTCAGTTGGCAGTGTCAAGGGCATTTGGCGACAAAAGCCTGAAGAAACACTTGAGCTCAGAACCATATGTGACTGTGGAGATAATAGATGATGATGCAGAGTATATTATATTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTAGATGCAATCAAGGATATAAAGGATGCTAGGTCTGCAGCAAAGTTCCTTACTGAAGAAGCACTTAAAAGGAAAAGCTCAGATGATATATCTTGCGTTGTTGTGAAATTTCAGTGA 849 0.404 MTGKEIFHKMKEKVLGLSDADSGKGKSKMKKHITHGFHLVKGRAGHAMEDYLVAQFKQVDNNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPADAVMRAYRKTDSTILEKSGELGRGGSTAVTAILINCQELVVANIGDSRAVLCKNGVAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTVEIIDDDAEYIILASDGLWKVMSNQEAVDAIKDIKDARSAAKFLTEEALKRKSSDDISCVVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01442 282 SMART PP2C_4 24 279 IPR001932 -
Cca04g01442 282 Gene3D - 28 282 IPR036457 -
Cca04g01442 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Cca04g01442 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Cca04g01442 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Cca04g01442 282 CDD PP2Cc 35 281 IPR001932 -
Cca04g01442 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Cca04g01442 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01442 Cca-Chr4 19631759 19636517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01442 1 282 PP2C-type Phosphatase Gene Family AT3G15260 77.509 4.37e-166 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01442 K17506 - gmx:100787942 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01442 04 19631759 19636517 Cca04g01442 04 19631759 19636517 ECH