Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01431 ATGGAGTTTCAAAGACCCCTTTTCCTCTTGTTTCTCCTCACCCTTGTCTCAAGCTCCCAAGCCCTCAAATTAAACGTTGGTGGAAACCAAGGGTGGGTTCCAAACCCTTCCGAGAGTTACAACAATTGGGCCGGAAGAAACAGGTTCCAAATCAACGACTCAATAGTTTTCAAGTACAAGAAGGGTTCGGACTCGGTGTTGGAAGTGAAGAAGGAGGATTACGACAAGTGCAACAAGAGCAACCCTATCAAGAAGTTCGAAAACGGTGACACGGAATTCAATTTTGACCCCAAGAAcaccaccatcaccaaaatcaccaacacaaccaccaAAGATTTCACCTTCACCGTCGCCAAAGCCAAACCCACCAACCGTGTCGCCGCCGTCGCCGCCAGCCACCTCACCGTCTCCGGCCATTTCTCCGGTGCCTTCCGCCGCACCTCCGGCGAATTCTCCGGCCCCGGCCGGCGGACCCACGGCAAATTCTCCGGGGCCGGCGAGCATAACTCCGGCAGGGGCCCCCACATCTACACCGTCAACCTCCCCTCCGGCGCCGGCACCGGAGACGGGGACCCCACCACCGGCACCGGGTTCATCACCGCCGGCGCCGCCGGGAGCAAATCCGACGCCGGCACCGTCGTCTAA 645 0.5504 MEFQRPLFLLFLLTLVSSSQALKLNVGGNQGWVPNPSESYNNWAGRNRFQINDSIVFKYKKGSDSVLEVKKEDYDKCNKSNPIKKFENGDTEFNFDPKNTTITKITNTTTKDFTFTVAKAKPTNRVAAVAASHLTVSGHFSGAFRRTSGEFSGPGRRTHGKFSGAGEHNSGRGPHIYTVNLPSGAGTGDGDPTTGTGFITAGAAGSKSDAGTVV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01431 214 MobiDBLite consensus disorder prediction 147 214 - -
Cca04g01431 214 Pfam Plastocyanin-like domain 32 93 IPR003245 GO:0009055
Cca04g01431 214 Gene3D - 21 121 IPR008972 -
Cca04g01431 214 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 96 - -
Cca04g01431 214 PANTHER BLUE COPPER PROTEIN 1 96 IPR039391 GO:0009055
Cca04g01431 214 ProSiteProfiles Phytocyanin domain profile. 22 148 IPR003245 GO:0009055
Cca04g01431 214 SUPERFAMILY Cupredoxins 21 98 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01431 Cca-Chr4 19140192 19141053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01431 7 96 Phytocyanin Superfamily AT5G53870 56.667 2.02e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01431 - - gmx:100795901 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01431 04 19140192 19141053 Cca04g01431 04 19140192 19141053 ECH