Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g01414 | ATGAGTGTGGGAATACCTCACAGGCCACCCCCTTACAACTTGAATGCTATGTTAGCTTCTGCTCGCACACCGATTTCGCACTCTGGCCAGCAACTGCATCCAAGTTATTTCCAGGCACAGTCAAGACCATTTCATTATCAGCAGTACATCCCTCATGTCTATGGAAGCTATGGCACCAATGGATTACCTTATCTTGGAGGTGCTGCTATGACTAGTTTCTTTAATCCTATAATTGTTATGTTTGGTGAGATGGTCTTGACTAGGATTTTTGGGGTCTCAGATGCAAATATGTTTGCATACCCTCATAATAGAAGTGGCAGCCCTAGAATGAGAAGGCAGGAAATGCAGATTGACAAGTCTCTGAACAGACTTTCTATCTTCCTCCTATGTTGTATCATTTTGTGTCTTCTCTTATTTTGA | 420 | 0.4238 | MSVGIPHRPPPYNLNAMLASARTPISHSGQQLHPSYFQAQSRPFHYQQYIPHVYGSYGTNGLPYLGGAAMTSFFNPIIVMFGEMVLTRIFGVSDANMFAYPHNRSGSPRMRRQEMQIDKSLNRLSIFLLCCIILCLLLF | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g01414 | 139 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE | 3 | 139 | - | - | |
Cca04g01414 | 139 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 3 | 139 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g01414 | Cca-Chr4 | 18686445 | 18686864 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g01414 | 1 | 134 | C3H Transcription Factor Family | AT4G27470 | 44.444 | 2.01e-11 | 57.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g01414 | K10666 | - | gmx:100817526 | 199.519 |