Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01403 ATGGAGGAGAATGAACAAGAATCACGACCATTGGCTTTTACTCCAACATGGTCTATTGCTATTGTCTTAACATTTTTCCTTGCTTTTTCCTTGCTTCTAGAGCGTGCCATTCACCATTTAAGCGATTGGTTGAAGAAAACGAATCAAAAGCCCTTTCTTGCAGCATTGGAAAAAATGCAAGAAGAGATGCAGCTGCTTGGATTTGTATCACTTCTATTAATAGCTACCTCAGACATGATAGCAAATATTTGCATTCCAGAGAAGTTCTACAATGATGCTTTTGCTCCATGTACTAGATCCGAGATTGCTGAAGAAACGGAAAAGAATGACACAGAAGAGCATAAATTGTTGATGGCTTCCACTAACCCACGCGTAATTAGGAGAATATTGGATGACATAAATAAAAAATCTTGCAATGAGGGTTATGAACCTTTTGTTTCACATGAAGGTCTAGAGCAATTGCACCGTTACATTTTTATCATAGCTGTAACACACATATCTTTCAGTTGTCTCACAATGTTGTTAGCAATTGTGAAGATTCACAGTTGGAGAACGTGGGAGAATGAGGCTCAAATAGATCCACACAATTGTTCATTTTCTGAAATCCCAAGACATGTGCCAGCACTAAGTCAAACATCCTTAATTATGGTTCATAGATCAAATCCATTGTTCAGAAACACTTTCCTCATTTGGGTGGCTTGTTTTTTACGACAATTTTGGAATTCTTTGGTTCGCAGTAATTATCTTACACTTCGCAAAGGCTTCATCATGGTATCCAATTCTGTTTGTCTGAAGTCTAAATGTTTCTTATTCGAAAGCAACATAATATGcactactagaaaaattaaaatttgtgacgaaaatttTGTCCCACTCTGGGGATTTGTTGTTGCTCTCATGCTATTCAACATTAAAGGATCAAATCTCTATTTCTGGATAGCTATCATTCCAATTTTTCTAGTTCTTTTAGTTGGAACAAAGCTACAGCATGTTGTTGTAACCTTGGTATTAGAGAATGCTGAAATAACTGATTTCTTCTCTGGAGCAAAGTTGACACCTCGTGATGAACTTTTCTGGTTTAAGAAGCCCGAACTACTACTTTCCTTGATTCATTTCATTCTCTTTCAGAATGCATTTGAGTTGGCTACATTCTGTTGGTCCTGGTGGGAGTTTGGAAACAGCTCTTGCTTTAACAGGAATCATCTCCTCGTGTATTCGAGGCTAATCTTGGGGTTCATTGGACAGTTTATCTGCAGCTACAGTACTTTGCCCCTCTATGCACTTGTTACACATATGGGAACAAACTATAAGGCAGCATTAATTCCAGAGAGTGTAAGGGCGACAATTGATGTCTGGGGGAAGGCAGCAAAGAGAAACAGAAAGCAAGGCAAGGTCACTGATGACTTTGAATTAGAGCCACTAAGGGAAGAAACTTCAGCAAATAATGTTTCAAGTAGGCCAGTTGACCCCGTCCTTCGACCCTCTGCTTCAGTTAACTCAGAACTCCGTTTTAGAACAGAAACAATTCCAAGATCTACTTCTATGCCAAGAGAAATATAA 1560 0.3795 MEENEQESRPLAFTPTWSIAIVLTFFLAFSLLLERAIHHLSDWLKKTNQKPFLAALEKMQEEMQLLGFVSLLLIATSDMIANICIPEKFYNDAFAPCTRSEIAEETEKNDTEEHKLLMASTNPRVIRRILDDINKKSCNEGYEPFVSHEGLEQLHRYIFIIAVTHISFSCLTMLLAIVKIHSWRTWENEAQIDPHNCSFSEIPRHVPALSQTSLIMVHRSNPLFRNTFLIWVACFLRQFWNSLVRSNYLTLRKGFIMVSNSVCLKSKCFLFESNIICTTRKIKICDENFVPLWGFVVALMLFNIKGSNLYFWIAIIPIFLVLLVGTKLQHVVVTLVLENAEITDFFSGAKLTPRDELFWFKKPELLLSLIHFILFQNAFELATFCWSWWEFGNSSCFNRNHLLVYSRLILGFIGQFICSYSTLPLYALVTHMGTNYKAALIPESVRATIDVWGKAAKRNRKQGKVTDDFELEPLREETSANNVSSRPVDPVLRPSASVNSELRFRTETIPRSTSMPREI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01403 519 PANTHER MLO-LIKE PROTEIN 11 4 479 - -
Cca04g01403 519 PANTHER MLO-LIKE PROTEIN 1 4 479 IPR004326 GO:0006952|GO:0016021
Cca04g01403 519 Pfam Mlo family 9 480 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01403 Cca-Chr4 18489557 18504151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01403 2 518 MLO family AT5G53760 55.459 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01403 K08472 - gmx:100780486 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01403 04 18489557 18504151 Cca04g01403 04 18489557 18504151 ECH