Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01348 ATGGCGAGAGTGAAGCACACGTCAGCTTCTCGCAAGCCTGGAAATTACAACCCGCCGATTATACACAAGGACCTGAAATGTGATAATATATTTATCAATGGTCATCAAGGAGAAGTTAAAATTGGAGATTTGGGGCTGACAACTTTCTTGGAGCGAAGTAATGCCAAGAGTGTAATTGAGCCATTGTCTTTAGAGCTAGGGAACCCGTCTatgaagaGAAATTACAACCCGCAGATTATACACAAGGACCTGAAATGTGATAATATATTTATCAATGGTCATCAAGGAGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAGCGAAGTAATGCCAAGAGTGTAATTGAGCCATTATCTTTAGAGCTAGGGAACCCGTCTATGAAGAGTCAGCTAAAGGCATTAGCAGCTGTTGAGGCTACACCATGGAAGAATTTCAATAAAAAGAAAGAGGCTGCCCTTAAGAAAAGGAAAGAGGGAACCCTTCAAGTTCAGAATAAACAGGTCGAAGATCCATAG 525 0.4114 MARVKHTSASRKPGNYNPPIIHKDLKCDNIFINGHQGEVKIGDLGLTTFLERSNAKSVIEPLSLELGNPSMKRNYNPQIIHKDLKCDNIFINGHQGEVKIGDLGLATFLERSNAKSVIEPLSLELGNPSMKSQLKALAAVEATPWKNFNKKKEAALKKRKEGTLQVQNKQVEDP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01348 174 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 59 - -
Cca04g01348 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Cca04g01348 174 Gene3D Transferase(Phosphotransferase) domain 1 71 128 - -
Cca04g01348 174 Gene3D Transferase(Phosphotransferase) domain 1 6 70 - -
Cca04g01348 174 SUPERFAMILY Protein kinase-like (PK-like) 77 112 IPR011009 -
Cca04g01348 174 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01348 174 MobiDBLite consensus disorder prediction 153 174 - -
Cca04g01348 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 20 32 IPR008271 GO:0004672|GO:0006468
Cca04g01348 174 SUPERFAMILY Protein kinase-like (PK-like) 16 55 IPR011009 -
Cca04g01348 174 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 74 118 - -
Cca04g01348 174 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 74 118 - -
Cca04g01348 174 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 15 59 - -
Cca04g01348 174 Pfam Protein kinase domain 75 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01348 Cca-Chr4 17397465 17402116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01348 18 59 MAP Kinase Kinase Kinase AT3G18750 80.952 8.26e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Cca04g01348 Pkinase 4.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01348 K08867 - ccaj:109791065 186.037