Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g01328 | ATGACCATTCATCCACTCCCTTCCATGCTTGTCATAGCAAACCTACTCTTCTTTTCGCACCAAATTTCCTCCGAAACTGACACGCTCACCCAGTTTCAGTCACTTCCCGATGGAACCAGAACCACCTTGGTATCCAAAGATGGAACCTTCGAGTTGGGTTTCTTCAGCCCAGGTAGTTCCACAAACCGCTACCTAGGAATCTGGTTCAAGAACATCCCACTAAAAACCGTCGTTTGGGTCGCCAACCGTGACAACCCTATCAACAACAACTCCACCAAGTTAACCATAGCCAAAGAAGGAAACCTGGCCCTCCTCACCGAAAACGACACCGTTCACTGGTCAACAAACGCAACAGCAAAAGCGATCAACATCAACGTTGTAGCACAACTCTTGGATTCAGGAAACTTGGTCCTAAGAGACGAGAAAGACAACTATTCTCAAAACTTGTTGTGGCAAAGCTTCGACCATCCTTCGGACACGCTTTTACCAGGAATGAAACTAGGATGGGAAGTAACAAAGGATGTTAATCTCAACAGGTACCTCACTGCATGGAACAACTGGGAAGACCCATCTTCGGGTCACTTCACTTATGGCTTCTCGAGAAGCACTATTCCCGAGAAGCAAATGTGGAACGGGTCATCATTGGTCTTCCGAAACGGTCCTTGGAATGGTATTCGATTCAGCGGCACACCCTCGTTGAAGCACCGCGCATTGTTCGGTCTTACTTACATGTACGACGGGGACGAGTGTTATTTCCAATTCTACCCCAAGGACAAGTCGTTGATTTCCAGAATCGTCCTCAACCAAACCCTATACGTTCTTCAGCGTTTCATTTGGGTCGAGGGAAGTCAAAAGTGGGAGTTGTACATGACTGTTCCAGGAGGATACTGTGACGGGTATAACCACTGTGGCTCCTTCGGGTACTGTGCCATGGTGGGTAAGTCTCCGCTGTGCGAGTGTTTGCATGGGTTTGAACCAAAATCGCCGCGGAATTGGGTTGCAAGGAATTGGAGTGAAGGGTGCGTGCGTAGTAGCAAAACATGGAGGTGTAGGGAGAAAAACAATGACGGTTTCGTCTTGTTTAGTAACATGAAGGTTCCGGACACAAACACGTCGTGGATTAATAGAAGTATGACAATAGAGGAATGTAAGGCCAAGTGTTGGGAAAATTGTTCGTGTACTGCGTATGCTAACTCAGACATCATTGGAAAGGGAAGTGGTTGTATTCTCTGGTTTGGCGATCTATTGGACATGAGACAGCTTCCAAATGCAGGGCAAGATCTGTACGTTAGAGTCTACATCTCCCAAATGGAAAATCAAGATGCAAAAGGTGGTTCAACTTCTAGGAAAGTGGTAGTTGTGGTCACAACAGTTGTTTCATCTGTTATTATTGCGATGGTTGCAATTTTCATGCTCGTTTACTGCAACAGTAAAACCAAATTTAGAGGCAAAGATAACATCAAGACAAAAGTTAAAATAGATGAGGACAAAGAAGATTTGGAGCTGCCTTTATTTGACTTTGATACCATAGCATGTGCTACTAATGATTTCTCAAGTGACAACAAGCTTGGACAAGGTGGTTTTGGTCCAGTATATAAAGGCACATTACCAGATGGACAAGATATTGCAGTCAAAAGGCTTTCACATACATCTACACAAGGATTAACAGAATTTAAGAATGAGGTTATATTTTGTTCTAAACTTCAACATCGGAATCTTGTTAAAGTTCTTGGTTGTTGTATCGAAGAACAAGAGAAATTACTCATTTATGAGTACATGCCCAACAAAAGTCTAGACTTCTTTCTTTTTGATTATTCTCAAAGCAAACTTCTAGATTGGTCCAAGCGATACAACATTATAAATGGAATTGTCCGGGGATTGCTTTATCTTCACCAAGATTCTAGATTGAGGATCATACATAGAGATTTAAAAACAAGTAATATTTTGCTAGATAATGACATGAATCCAAAAATTTCTGATTTTGGGTTAGCCCGAATGTGTAGAGGTGATCAGGTTGAAGGGAATACAAGTAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTGATGGAGTATTTTCTATCAAATCTGATGTCTATAGCTTTGGTATCTTACTACTAGAAGTTTTAAGTGGAAAGAAAAACAAAGGCATTTCCTGTTCTAACGACAACAATAATCTTGTTGGACATGCATGGAGGTTGTGGAAAGATGGCAATCTAATGCAATTTATTGACTCTAATTTAGAGGATTCATGCATTCTATCTGAAGCCTTGCGTTGCATTCATATTGGTCTTTTGTGTGTGCAACATCATCCAAATGATAGGCCAAACATGGCATCTGTGGTTGCTTTATTAAGTTGCGAGAACGCATTGCCTCCACCAAAGGATCCTAGTTACTTAATAGAAGAAACCTCAACTGAAAGCGAATTTTATTCTAAGAATTTGACATCCTTGTCAAATAATGATGTCACTATTTCAATGTTAAAGAGGTCAGGTCAGATTCTGACCTGGACAGCCCACTTGCCTTCCAACCCTGAGCCTATAAGGCGAGAGGGCTTGAGGCCTGGCTTTTGTGGTTCACAGTCAGATATTGACCGAGTGACTCTTAGCGAGGGAGCCGATCAAGGTTATAGTCGCCCTGAGCCTATAAGGCGTGAGGGCTTGAGGCCTGGCTTTTGTGGTTCACAGTCGGATATTGACCGAGTGACTCTTAGCGAGGGAGCCGATCAAGGTTATAGTCGGTCAATCGTTGGTAGAGGGGTCAGGTCGAATTCTGACCTGGACAGTCCACTTGCCTTCCAGCCCTGA | 2817 | 0.4292 | MTIHPLPSMLVIANLLFFSHQISSETDTLTQFQSLPDGTRTTLVSKDGTFELGFFSPGSSTNRYLGIWFKNIPLKTVVWVANRDNPINNNSTKLTIAKEGNLALLTENDTVHWSTNATAKAININVVAQLLDSGNLVLRDEKDNYSQNLLWQSFDHPSDTLLPGMKLGWEVTKDVNLNRYLTAWNNWEDPSSGHFTYGFSRSTIPEKQMWNGSSLVFRNGPWNGIRFSGTPSLKHRALFGLTYMYDGDECYFQFYPKDKSLISRIVLNQTLYVLQRFIWVEGSQKWELYMTVPGGYCDGYNHCGSFGYCAMVGKSPLCECLHGFEPKSPRNWVARNWSEGCVRSSKTWRCREKNNDGFVLFSNMKVPDTNTSWINRSMTIEECKAKCWENCSCTAYANSDIIGKGSGCILWFGDLLDMRQLPNAGQDLYVRVYISQMENQDAKGGSTSRKVVVVVTTVVSSVIIAMVAIFMLVYCNSKTKFRGKDNIKTKVKIDEDKEDLELPLFDFDTIACATNDFSSDNKLGQGGFGPVYKGTLPDGQDIAVKRLSHTSTQGLTEFKNEVIFCSKLQHRNLVKVLGCCIEEQEKLLIYEYMPNKSLDFFLFDYSQSKLLDWSKRYNIINGIVRGLLYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARMCRGDQVEGNTSRVVGTYGYMAPEYAIDGVFSIKSDVYSFGILLLEVLSGKKNKGISCSNDNNNLVGHAWRLWKDGNLMQFIDSNLEDSCILSEALRCIHIGLLCVQHHPNDRPNMASVVALLSCENALPPPKDPSYLIEETSTESEFYSKNLTSLSNNDVTISMLKRSGQILTWTAHLPSNPEPIRREGLRPGFCGSQSDIDRVTLSEGADQGYSRPEPIRREGLRPGFCGSQSDIDRVTLSEGADQGYSRSIVGRGVRSNSDLDSPLAFQP | 938 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g01328 | 938 | ProSiteProfiles | Protein kinase domain profile. | 517 | 794 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca04g01328 | 938 | SUPERFAMILY | Protein kinase-like (PK-like) | 500 | 802 | IPR011009 | - | |
Cca04g01328 | 938 | Pfam | D-mannose binding lectin | 76 | 184 | IPR001480 | - | |
Cca04g01328 | 938 | MobiDBLite | consensus disorder prediction | 916 | 938 | - | - | |
Cca04g01328 | 938 | MobiDBLite | consensus disorder prediction | 875 | 899 | - | - | |
Cca04g01328 | 938 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 151 | IPR001480 | - | |
Cca04g01328 | 938 | MobiDBLite | consensus disorder prediction | 920 | 938 | - | - | |
Cca04g01328 | 938 | Pfam | Protein tyrosine and serine/threonine kinase | 520 | 787 | IPR001245 | GO:0004672|GO:0006468 | |
Cca04g01328 | 938 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 77 | 190 | IPR036426 | - | |
Cca04g01328 | 938 | CDD | STKc_IRAK | 523 | 788 | - | - | |
Cca04g01328 | 938 | ProSiteProfiles | PAN/Apple domain profile. | 350 | 433 | IPR003609 | - | |
Cca04g01328 | 938 | PIRSF | SRK | 1 | 834 | IPR024171 | GO:0004674 | |
Cca04g01328 | 938 | Gene3D | Transferase(Phosphotransferase) domain 1 | 593 | 794 | - | - | |
Cca04g01328 | 938 | Pfam | S-locus glycoprotein domain | 217 | 328 | IPR000858 | GO:0048544 | |
Cca04g01328 | 938 | SMART | serkin_6 | 517 | 788 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca04g01328 | 938 | CDD | B_lectin | 34 | 157 | IPR001480 | - | |
Cca04g01328 | 938 | CDD | PAN_AP_plant | 351 | 432 | - | - | |
Cca04g01328 | 938 | Gene3D | Phosphorylase Kinase; domain 1 | 476 | 592 | - | - | |
Cca04g01328 | 938 | Gene3D | - | 20 | 154 | IPR036426 | - | |
Cca04g01328 | 938 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 15 | 817 | - | - | |
Cca04g01328 | 938 | SMART | ntp_6 | 353 | 432 | IPR003609 | - | |
Cca04g01328 | 938 | SMART | blect_4 | 34 | 157 | IPR001480 | - | |
Cca04g01328 | 938 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 638 | 650 | IPR008271 | GO:0004672|GO:0006468 | |
Cca04g01328 | 938 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 15 | 817 | - | - | |
Cca04g01328 | 938 | Pfam | PAN-like domain | 350 | 418 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g01328 | Cca-Chr4 | 16975819 | 17001575 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g01328 | 469 | 834 | Receptor kinase-like Gene Family | AT4G23150 | 52.717 | 5.88e-126 | 394 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Cca04g01328 | PK_Tyr_Ser-Thr | 3.6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g01328 | - | - | gmx:100792537 | 1144.03 |