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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca04g01316
ATGTCAGATGATCAATTTCAAGCGAGTGGAAACTGGTGGGAATCAGCAAGAAACGTGAAGTTCGAAAGTGGGGAATCACAGTCTTCATCTTCTGGACTCACCAACATGGGAAACTATGGTTGGCAAAACCATGACATGGCAAGGTCTTCCTCTGTGGATAACTCTGCCTCAGGTGGTTCCACTGTGGTTTTCCATGACCAGAAGCAGCTTCAGCTTCAGcatcagcatcatcagcatcatcatcatcatcatcatGACTCAGCCACCTCCACCAATGACCCCAACTTGCACATGATGGGCTTGGGCCTCTCATCCCAAGCCATGGACTGGAATCAAGCATCTTTGCAGCTGAGAGGTGAGAAGGGTTCAGATAACAGTTTCAGGTCGATGTTGCAAGAGAATTTGAGCTCACCAGGGAGCAGTTTTCAGCAAGAGAGTGGGAACAACAACAATATTGGGTTGTCTCATCACCATCATCAACAAGTTCATTGGAGGCCAGAAAAGTTGTTCTCTGCTGAGTCATCAAGCAATGATCAATTCAAGAGGGGTTTCTCTTTGGACCAAACACAGTTCAGTAGTCCTCAATACAGCTCTGGGGACAGCACTGTCACAAGCCAAGGTTTGCCTTGTTCTTTTCAGATGGACTATGTTGGCAACCCTTCTTCAATATTGCAAGGGCTTTTGGGACAAGAGAGcaacaacagcagcaacaacaacaacaaccaaccccaccaaGGTGCTGGTGCCATGAATTTTCCTTACTCAGCTACTACCTATGGATTAAACTCCAATATTGAGTTGGTTCCTTCTTGGTCCAAAGTTCCTCAGTTTCTGAGAGCTTCACCACCAAAACAACAACCCAATAACCAGCTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTAATTCTGATCCTGCTATCAAGGATGCAAGATCCAGCTTCATCCCCTCGTTGCAACCACCCTTCTCCACATCAAACTTCGACGTACAATCAAAGAATATATGTGATGTTAGAGACTCAGGTGGTGTGGTGAAGAAAAGTGGGGGTGAGCCAGCACCCAAAAGGCCGAGGAACGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCGTCAGTGCTCTCTGAAGCCATTGAATATATCAAATTTCTCCATGAGCAAGTCACCGTGTTAAGTACCCCATATATGAAAAGTGGTGCTCCCATACAACATCAGCAGAGTTCTGGTAAATCAAAGGAATCAGAGGGTCCAAAGCAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCTAGTACATTCCCAGTGACTAATGAACAACCATTTGAATTTTGGAATCCAACATATGGAGGAACATACAGATAG
1440
0.4333
MSDDQFQASGNWWESARNVKFESGESQSSSSGLTNMGNYGWQNHDMARSSSVDNSASGGSTVVFHDQKQLQLQHQHHQHHHHHHHDSATSTNDPNLHMMGLGLSSQAMDWNQASLQLRGEKGSDNSFRSMLQENLSSPGSSFQQESGNNNNIGLSHHHHQQVHWRPEKLFSAESSSNDQFKRGFSLDQTQFSSPQYSSGDSTVTSQGLPCSFQMDYVGNPSSILQGLLGQESNNSSNNNNNQPHQGAGAMNFPYSATTYGLNSNIELVPSWSKVPQFLRASPPKQQPNNQLHFTNNAPFWNANSDPAIKDARSSFIPSLQPPFSTSNFDVQSKNICDVRDSGGVVKKSGGEPAPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSSGKSKESEGPKQDLRSRGLCLVPVSSTFPVTNEQPFEFWNPTYGGTYR
479
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca04g01316
479
MobiDBLite
consensus disorder prediction
22
96
-
-
Cca04g01316
479
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
359
408
IPR011598
GO:0046983
Cca04g01316
479
MobiDBLite
consensus disorder prediction
130
157
-
-
Cca04g01316
479
MobiDBLite
consensus disorder prediction
22
69
-
-
Cca04g01316
479
MobiDBLite
consensus disorder prediction
423
447
-
-
Cca04g01316
479
PANTHER
TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1
8
468
-
-
Cca04g01316
479
SMART
finulus
370
414
IPR011598
GO:0046983
Cca04g01316
479
MobiDBLite
consensus disorder prediction
226
249
-
-
Cca04g01316
479
PANTHER
TRANSCRIPTION FACTOR BHLH83-RELATED
8
468
-
-
Cca04g01316
479
Gene3D
-
369
431
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca04g01316
Cca-Chr4
16677804
16681684
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca04g01316
118
479
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G20640
44.110
5.13e-73
234
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca04g01316
-
-
gmx:100818424
747.658
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