Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01270 ATGAAACATCCAAGAATATATAGAGAGTATGCAGTACTTACCAATCTGCCGTACGAGTTTGAAAGTTGGATGGAAAATAAAGTGAATAGAAGTGAAGCAATTTGGAGTGAGAGAAAGAAGGATAAGGAAAGTTTGATAGCGATGGGTAAGGAGGTGCTGAATGCCCTGGACGTAGTAAAAACACAATGGTATCACTTCAGTGCAATCATCGTGGCTGGAATGGGCTTCTTCACCGACGCATATGATCTCTTCTGCAATGTGAGGCGTGGATTTCTCAATGAGGAaaatattttatttatattgcaaaaatttcctgcggaataa 324 0.3673 MKHPRIYREYAVLTNLPYEFESWMENKVNRSEAIWSERKKDKESLIAMGKEVLNALDVVKTQWYHFSAIIVAGMGFFTDAYDLFCNVRRGFLNEENILFILQKFPAE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01270 107 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 50 85 - -
Cca04g01270 107 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01270 Cca-Chr4 15576199 15577103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01270 51 85 Inorganic Solute Cotransporters AT2G38940 88.571 7.10e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01270 K08176 - nnu:104600862 75.8701