Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01260 ATGGCCACCTTCATGTTAAGGTCTAACAAAGCAGTTCATGCCTTTGGCTGGCTCTGTCTCCTGCTGATGGTGCACAAGGGTGCTTCCTATGATTTCATTGTTGGGGGACAAAAGGGTTGGAGTGTTCCAAATGACCCCAGTTTCAACCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTCAAATTGGAGACTCCCTTGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTCTATGTAAAGAGTGAAGACTATGCCAGCTGCAACACAGGCTCACCTTATGCAAAATACTCTGATGGCCACTCAGTCATCAAACTAAACCAATCAGGGCCTCACTTCTTCATAAGTGGCAACAAAGATAACTGTCTCAAAAATGAAAAGTTGACAGTGATTGTGCTAGCTGACAGGAGCAAAAACACAAACCAAACAACCAATGCTTCTCcaccctcaccacaatcaccatcatctccttcaccagcaccTACTGGCCAAGAGGGTCAATCTCCCCCACCAGACACAAACCAAACACCAAGCCCTGTCAGTGAACCTCCCCCTCATCCTAATGCTGCTGCTTCAGCCTTTGTCTCCTTTGCTGCCTCTGTTGGAGCATTCATGGCTTCAGTGCTGGTTTTCTCCCTCTAA 642 0.4377 MATFMLRSNKAVHAFGWLCLLLMVHKGASYDFIVGGQKGWSVPNDPSFNPFNQWAEKSRFQIGDSLVFNYQSGQDSVLYVKSEDYASCNTGSPYAKYSDGHSVIKLNQSGPHFFISGNKDNCLKNEKLTVIVLADRSKNTNQTTNASPPSPQSPSSPSPAPTGQEGQSPPPDTNQTPSPVSEPPPHPNAAASAFVSFAASVGAFMASVLVFSL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01260 213 Gene3D - 30 146 IPR008972 -
Cca04g01260 213 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Cca04g01260 213 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 213 - -
Cca04g01260 213 MobiDBLite consensus disorder prediction 136 190 - -
Cca04g01260 213 CDD OsENODL1_like 30 133 IPR041846 -
Cca04g01260 213 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Cca04g01260 213 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Cca04g01260 213 MobiDBLite consensus disorder prediction 150 186 - -
Cca04g01260 213 PANTHER BLUE COPPER PROTEIN 5 213 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01260 Cca-Chr4 15309683 15311401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01260 5 195 Phytocyanin Superfamily AT3G20570 49.744 2.25e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01260 - - gmx:100781182 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01260 04 15309683 15311401 Cca04g01260 04 15309683 15311401 ECH