Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01226 ATGGCCTCCATGCCCTTGGGGcaccaccaccaccaccaAACGGCGGCGGCGCCGTCTACGCAGTTGCTCGCGCAACCCGAAGTGGCTCGCCGGAGCTCCGATATGGAGACCGATAAGGATATGTCAGCTACTATCATTGAGGGGAATGATGCCGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAGAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACAGGATCGTTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAGACTGGAGAGGCAGTGGCTATTAAAAAGGTCTTGCAAGATAGGCGGTACAAAAATCGTGAACTGCAGTTAATGCGCTTAATGGATCACCCAAATGTAATTTCCCTAAAGCACTGTTTCTTCTCTACAACAAGCAAAGACGAACTTTTTCTAAACTTGGTTATGGAATATGTCCCCGAGACTATGTACCGAGTTATAAAGCACTACAATACTATGAACCAGAGAATGCCTCTCATCTATGTGAAGCTGTATACATATCAAATCTTTAGGGGATTAGCATATATCCATTCCACACTGGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCCAAAGTTCTGGTCAGGGGTGAAGCAAACATTTCATACATATGTTCACGTTACTATCGAGCTCCAGAACTAATATTTGGTGCAACAGAATACACAGCTTCTATTGATATCTGGTCGGTTGGTTGTGTTCTTGCAGAACTTCTTCTAGGACAGCCATTATTTCCTGGAGAAAATCAGGTGGACCAACTTGTGGAGATTATTAAGGTTCTTGGTACTCCGACTCGAGAGGAAATCCGTTGCATGAACCCGAATTATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTCCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCCAATGCCCGCCTACCTAATGGCCGTCCACTGCCCCCCCTTTTCAACTTTAAACAGGAATTAGCTGGAGTATCACCTGAACTGATCAATAGGCTCATCCCAGAGCATATTAGGCGGCAAACCGGTCTCAGTTTCCCTGTTTCTGCCGGTACATAG 1245 0.4522 MASMPLGHHHHHQTAAAPSTQLLAQPEVARRSSDMETDKDMSATIIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVIKHYNTMNQRMPLIYVKLYTYQIFRGLAYIHSTLGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVRGEANISYICSRYYRAPELIFGATEYTASIDIWSVGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGVSPELINRLIPEHIRRQTGLSFPVSAGT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01226 414 MobiDBLite consensus disorder prediction 1 37 - -
Cca04g01226 414 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01226 414 SMART serkin_6 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01226 414 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Cca04g01226 414 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 21 406 - -
Cca04g01226 414 Gene3D Phosphorylase Kinase; domain 1 59 153 - -
Cca04g01226 414 SUPERFAMILY Protein kinase-like (PK-like) 73 382 IPR011009 -
Cca04g01226 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Cca04g01226 414 CDD STKc_GSK3 69 361 IPR039192 -
Cca04g01226 414 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01226 414 PANTHER OS02G0236200 PROTEIN 21 406 - -
Cca04g01226 414 Gene3D Transferase(Phosphotransferase) domain 1 154 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01226 Cca-Chr4 14443278 14448649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01226 78 396 MAP Kinase Gene Family AT3G59790 35.629 7.79e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Cca04g01226 Pkinase 3.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01226 K14502 - gmx:100810924 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01226 04 14443278 14448649 Cca04g01226 04 14443278 14448649 ECH