Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01217 ATGAGGGTATTTTTCAACTTCAAAAACAAAAATTGGCTCCGGGTGGGAGACGACCTCAACCACCGCAACCTCACCGACCTGGCGAAGGAGTTCGACGACATCTTCCTCTTTCGCATGGGGCAGCAGAACCTGGTGGTGGTGTCATCGCCAAAGCTAGCAAAAGAGGTGCTGCACATGCAGGACGTGGAGTTCGAGTCCCGCACGCGCAACGTGGTGTTCGACATCTTCACCGGGAAAGGCCAGGACATGGTCTTCACCGTTTACGGCGAGCACTGGCGCAAGATGCGCCACATCATGATCGTCCCCTTCTTCACCAACAAGGTAGTGCAGCAGTACTGCCAGGGCTGGGAGGCTGAGGCCGCCGTCCACAATGTCTGCAACAACCCCAGAAGCTCAGAGCTCTTAATGGAGAGAGGAGTCGCTTGGCGCAGAGCTTTGAATACAACAATCCATTCTTCGAGTTCGTACACTCCGTCAAGGCCTCCTCGCCGATCAACTTCCTCGACGAGCACCGCTTCTTCTCTGATGCCGACGCTTCCGAGTATACGAAGATGGGGTTTGCTGGCAATGTTGAGCCATGTTTTATTGCAGGTATACGCACTTTCCAAGTCTCAATTGGGTTTTCGATTCGGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGCATCTGGCAGCAttccttattcttcttcttcttctCCCAATCCACCATGTTCCAGAATCTTCTCTCCCTCTAATGATGGGTCTCTCAGATCCGTTAATTTGAATAGTTGCGAAGGAAACGGTTACGACCATGCAGATTCATTGCCGTTGAGACTTTATAGGCTATGCAACGCATCTTTTTCGCCTGATGGACCTGTGTCAGAAGAGGCCATTGAGAAAGTTCGTGAGAAGTTAGAAAGAATCAAGCCATCAGATGTAGGTCTTGAACAAGAGGCACAAGTGGTACGGAATTGGTCTGCTCAAATGCTTGAACGAAATGGGAACCATCAATCTTTGCCACCTATCAAATATTTACATTTGCATGAATGTGACTCCTTCTCTATAGGAATTTTTTGCATGCCCCCCTCGTCTATCATTCCTCTCCATAATCATCCTGGAATGACAGTGTTGAGCAAGCTGTTATATGGCTCAATGTATGTTAAATCCTATGATTGGATTGATGCACCTGGCTCCACTAATCCATCTGAAGCTAGACCTGCGAAGCTTGTCAAAGATACTGAGATGACAGCACCAAGTGCTACGACGGTTCTTTATCCGGCCAGTGGAGGAAACATCCATTGTTTTAGAGCTATAACTCCGTGTGCAATCTTTGATATTCTGTCTCCCCCGTACTCTTCAGAGAATGGAAGACACTGCACCTACTTCCGGAGATCCCAACAGAAAGATCTTCCAGTTAATGTTCAGTTGAATGGAGTGACGGATTCTGAAGTGACTTGGTTGGAAGAGTTTCAACCTCCTGATGACTTTGTGATCCGAAGAGGGCTGTACAAAGGTCCAGTTATTAGAACTTGA 1518 0.4769 MRVFFNFKNKNWLRVGDDLNHRNLTDLAKEFDDIFLFRMGQQNLVVVSSPKLAKEVLHMQDVEFESRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRHIMIVPFFTNKVVQQYCQGWEAEAAVHNVCNNPRSSELLMERGVAWRRALNTTIHSSSSYTPSRPPRRSTSSTSTASSLMPTLPSIRRWGLLAMLSHVLLQVYALSKSQLGFRFGMVRLRIGMPWSASGSIPYSSSSSPNPPCSRIFSPSNDGSLRSVNLNSCEGNGYDHADSLPLRLYRLCNASFSPDGPVSEEAIEKVREKLERIKPSDVGLEQEAQVVRNWSAQMLERNGNHQSLPPIKYLHLHECDSFSIGIFCMPPSSIIPLHNHPGMTVLSKLLYGSMYVKSYDWIDAPGSTNPSEARPAKLVKDTEMTAPSATTVLYPASGGNIHCFRAITPCAIFDILSPPYSSENGRHCTYFRRSQQKDLPVNVQLNGVTDSEVTWLEEFQPPDDFVIRRGLYKGPVIRT 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01217 505 CDD cupin_ADO 346 447 - -
Cca04g01217 505 PANTHER PLANT CYSTEINE OXIDASE 4 273 505 - -
Cca04g01217 505 Pfam Cytochrome P450 11 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01217 505 Gene3D Cytochrome P450 6 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01217 505 Gene3D Jelly Rolls 289 479 IPR014710 -
Cca04g01217 505 SUPERFAMILY Cytochrome P450 11 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01217 505 SUPERFAMILY RmlC-like cupins 273 467 IPR011051 -
Cca04g01217 505 Pfam PCO_ADO 300 503 IPR012864 GO:0016702
Cca04g01217 505 MobiDBLite consensus disorder prediction 152 175 - -
Cca04g01217 505 PANTHER UNCHARACTERIZED 273 505 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01217 Cca-Chr4 14326775 14341278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01217 11 153 Monolignol Biosynthesis Gene Families AT2G30490 68.276 3.53e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01217 K23953 - gmx:100805101 456.062