Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01185 ATGGCTCAATTGCCGCCAAAAATTCCAAACATGGCACCAACTTGGCCAGATTTTTCTTCTCTTCACCAAAAGATGCCATCCCTCAAAACCATGTCATCAAACCAAAACCCTTCGTGGGTGGACGAGTTTCTCGACTTCTCGGCGGCGAGGCGCGGCACTCACCGGCGGTCGGTGAGCGACTCCATCACGTTCTTGGAGGCGCCATTGCTGGACCACCACCCTTGCAAGGATGGTAGTACTGGTGGCGGCGGTGACGACAACGAGTTCGAGAGGTTTGATGATGAACAATTCATGTCCATGTTTAGTGATGAAGCTTCAGGGaacaataatagtaataataacaataataatactaTGGTGGCACACACGTCGTTGTCCTCATCCAACCCTTCTACACCCTCTGATCACAACAGCATCAATGATGagaaggaaattatgaacaaggaaaaggaggaggaggaggaagaagagaagaagcaattgaagaatgagtcagatgaggatgaaAGCCATTGCAAACAAGAAACCACACAACCTCCCAACAATGATAATGATAGTAATGCAAATGCAACATGTTCCAGTGACAAAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCGGCTCAAAGATCAAGAGTGAGGAAACTACAATACATATCTGAGCTTGAGAGAAGTGTGACTTCATTACAGGCTGAAGTTTCAGTACTGTCTCCACGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGCTTTGAAGCAAAGAATCGCAGCGCTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCATCAACAAAACATAAAGAAGATGGCCAGTGCTGCAGATTCACCATCTCAATCACCAAAACCACGATGTGATACTCTCACCGAAAAGGAACAGCTTATCAATGTTTGA 990 0.4091 MAQLPPKIPNMAPTWPDFSSLHQKMPSLKTMSSNQNPSWVDEFLDFSAARRGTHRRSVSDSITFLEAPLLDHHPCKDGSTGGGGDDNEFERFDDEQFMSMFSDEASGNNNSNNNNNNTMVAHTSLSSSNPSTPSDHNSINDEKEIMNKEKEEEEEEEKKQLKNESDEDESHCKQETTQPPNNDNDSNANATCSSDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMASAADSPSQSPKPRCDTLTEKEQLINV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01185 329 MobiDBLite consensus disorder prediction 299 316 - -
Cca04g01185 329 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 326 - -
Cca04g01185 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Cca04g01185 329 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
Cca04g01185 329 Gene3D - 200 271 - -
Cca04g01185 329 MobiDBLite consensus disorder prediction 137 174 - -
Cca04g01185 329 MobiDBLite consensus disorder prediction 175 196 - -
Cca04g01185 329 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Cca04g01185 329 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Cca04g01185 329 Coils Coil 280 300 - -
Cca04g01185 329 Coils Coil 136 171 - -
Cca04g01185 329 MobiDBLite consensus disorder prediction 102 197 - -
Cca04g01185 329 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Cca04g01185 329 MobiDBLite consensus disorder prediction 71 90 - -
Cca04g01185 329 MobiDBLite consensus disorder prediction 299 329 - -
Cca04g01185 329 MobiDBLite consensus disorder prediction 102 136 - -
Cca04g01185 329 PANTHER BASIC LEUCINE ZIPPER 34 1 326 - -
Cca04g01185 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01185 Cca-Chr4 13703779 13707188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01185 1 278 bZIP Transcription Factor Family AT3G58120 58.804 9.87e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca04g01185 bZIP_2 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01185 - - gmx:778128 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01185 04 13703779 13707188 Cca04g01185 04 13703779 13707188 ECH