Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01183 ATGGTCTCGCATTGCTTCTTATGTTTACACTTCCCATGTTTTCTTCTCCTCGTTTCCGTTACATGTTGTTTTTCTCACCCTTCTCTCTTGGGCATACACCCTCTAGACGAGAAATATTACAGCTCTCAGGTGATCAAGTGTAAGGATGGATCAAAATCCTTCTCCAGAGACCGTCTCAATGACAACTTCTGTGACTGCCCTGATGGCACCGATGAGCCTGGAACTTCAGCTTGCCCCAATGGAAAATTTTATTGCAAAAACCTTGGTAGCAAGCCACAGTTTATAGTTTCTTCTCATGTTAATGATCATTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAAACATTTGTTGCCCCAACACTTGTGTCATGGGGGGGAACGCTAAGTACACGATTAGCAATTGCAAGCCAAAAGCAAGTCAAAATGGAGTGAAGTCAGAGGAATCAATTTATAACCTTACTGGTTTGAAATTGGCAATTATTCTACAAGTAGGGCTGGTTATTTTCCTGGTATTTCTCTGGAGCTTTCGTCGCCGCACCAGATCTAGAAGGAGGCATTACCATTGA 573 0.4223 MVSHCFLCLHFPCFLLLVSVTCCFSHPSLLGIHPLDEKYYSSQVIKCKDGSKSFSRDRLNDNFCDCPDGTDEPGTSACPNGKFYCKNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGNICCPNTCVMGGNAKYTISNCKPKASQNGVKSEESIYNLTGLKLAIILQVGLVIFLVFLWSFRRRTRSRRRHYH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01183 190 Pfam Glucosidase II beta subunit-like 16 153 IPR028146 -
Cca04g01183 190 PANTHER EXPRESSED PROTEIN 7 189 - -
Cca04g01183 190 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 7 189 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01183 Cca-Chr4 13686582 13691074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01183 29 130 Calmodulin-binding Proteins AT5G56360 67.961 2.46e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01183 - - gmx:100783506 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01183 04 13686582 13691074 Cca04g01183 04 13686582 13691074 ECH