Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01175 ATGATGAGAGAAAGTGCTAAGGGCAAGTGTGGATCTTCTTCTCTTCAATCCATGAAGGAGAAGGAAAAACACTTGGTGGATAAAATTCAAGGGATTTTCAACAACATTCAGTGTGCAAGAAAGGAGAGCAGGGGTAATGATATTGTGATCTTTGAGGAGCAGATGCATCAGTTGCTCCGCGAGTGGAAAGCGGAACTGGAGTCTCCAGCCACTTCCTTAGCTGATGGAAGCTTTGATTCCTTTACCAGCGAACTTGCTCAACTGTTGCAAGTGATTGAAGAGAAAGATGATGCAACTAGTCCATTAACAAAACTTGGGCCATTGAAGACTGAGCTCCCTACAAATAATATTAGCGACAACAATTTTCAGTTTTTTCAGGAGAAGCATTTTGATGATAACCAACCACTAGATCATACTTTTGAAGGCTCTGGTTCAGCTCTCTTCAACAATGCTTTTAATAACTCAGACATGGCCCAGTTGGATTATCATCCATTCAGTTTACATCAAGATATGAATGACAACCCAGTAGGTCACCACTCTGATTCGATTGGTCAGCTGGATTTATATCAGGGCCTCAGTCACAACACAGAAATGAAAAACTCAGAATCAACTCAATTTACTTTAGAAGGTTTTGATTGTAGCCAGTTCTTTGGAGCTGATGACACTGTGCAGCATGGAGAGAATGTTATACCCAACATTCTTCCTAATATCTGCCCTCCAGCTTCTGCTTTTTTAGCCCCAAAATGTGCCTTATGGGACTGTTTCAGACCTGCTAAAGGGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGCCATGAGCTTTTGGCAAATAACGAGGGTCTTCCTGGCATGACTCCAATTTTACGACCTGGGGGCATTGGCGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACACAGGGTAAGGAAGTTGGCATCCCTAGTTGTGAAGGCGCTGCTTCAACTAAGTCTCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTCGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCGTTTGAAAGTGGAAATAGAAAACAAAGATCACTTCCGGACTACAGTGGACGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGGGGGCAAAAGAGGTCCTATTACATGGATCCCCAGCCTCTTAGTTATCTTGAGTGGCACTTGTATGAGTACGAGATCAACAACCATGACGGTTGTGCATTATACAGACTAGAACTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAGGGAATCTCTTACTGATTTACAGAACAAAATGGGACAGCTTACTGCTGCTGTTGTATCACCAGATGATGGACAACCAGTCAAGGGAAAAACTAAGGCCGAGTTTGAAAATGATGGGTCTCCTGAAAAGTAA 1449 0.43 MMRESAKGKCGSSSLQSMKEKEKHLVDKIQGIFNNIQCARKESRGNDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKLGPLKTELPTNNISDNNFQFFQEKHFDDNQPLDHTFEGSGSALFNNAFNNSDMAQLDYHPFSLHQDMNDNPVGHHSDSIGQLDLYQGLSHNTEMKNSESTQFTLEGFDCSQFFGADDTVQHGENVIPNILPNICPPASAFLAPKCALWDCFRPAKGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTRESLTDLQNKMGQLTAAVVSPDDGQPVKGKTKAEFENDGSPEK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01175 482 PANTHER TRANSCRIPTION FACTOR VOZ2 2 476 - -
Cca04g01175 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Cca04g01175 482 MobiDBLite consensus disorder prediction 360 390 - -
Cca04g01175 482 MobiDBLite consensus disorder prediction 369 390 - -
Cca04g01175 482 MobiDBLite consensus disorder prediction 456 482 - -
Cca04g01175 482 MobiDBLite consensus disorder prediction 466 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01175 Cca-Chr4 13564097 13568331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01175 1 455 VOZ-9 Transcription Factor Family AT1G28520 51.739 2.50e-155 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Cca04g01175 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01175 04 13564097 13568331 Cca04g01175 04 13564097 13568331 ECH