Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01172 ATGGACATAGGAAAAGAAAGAACTCTTGAAGAAACGCCAACATGGGCTGTCTCAGTATTTTGCTTCTTCTTTCTTACAATATCTTTGATCATTGAGGGTGGTCTTCACAAATTGACTGAGATTTTAAGGAAGAGGAAAGGAAAATCCTTGGGGAAGGCTTTGACCAAAACCAAAACAGAAATGATGAAATTCGGTTTCATGTCCTTTCTTCTCACAATATCGGAAGTGCCCATATCCAAAATCTGCATCACCAAGGATGTGGCAAATTCTCTTCTACCATGTAAAGATGCTGTGGACTTAACAGGATTAACTTCAGCACCAGCTACTCGCACTTCAACCTCTGAATTTGACATAGCACCTGCTACCAACGAATCCACAATTGAGGTCAACTATTGTGAAGCAAAGGGAATGGTTAGTTTAATTTCAAGTGATGGAATTCTGCAGCTAAATATATTCATCTCGTTTTTGGCGGTGTTTCACATCTTGTTCTGCACATTGACAATGTGCCTTGGTAAGGCAAAGATGAGAAGATGGAAAAGATGGGAGGACGAGACTCGAACACTTGAATATCAGATAGCTAATGATCCAAGAAGATTCCAGTATACAGGTCAAACATTGATTGGCAAGCGTCATTTGAAATTCTGGAGCTACCATTCTCCTTTGCTTTGGATGGTTTGCTTTTTTCGGCAGTTCTATGGTTCAGTCTCAAAAGATGATTACTTTACTCTACGAAATGGGTTTATTGCAGCTAATATTTCTTTAGGCAGCAATTTCAACTTCAAGAAATTTCTTTCTCGAACTTATGATGAAGATTTTGAGAAGGTTATGGGAATCAGGATTTGGATCTGGATTTTCTCCATACTTTTCATATTTTTCAGCGCACATGAGTTCTACAATTACTACTGGCTTCCCTTTATTCCACTTGTGGTTGCTTTACTTGCTGGGGCAAAACTTCAAGTCATAATAACAAAGATGTGTGTAGATAGTTGCAAGGAAAACCCAGTGATCAAAGGAAGTCTACTTGTAACACCTAGTGATGCACATTTCTGGTTTCATAGACCTGAATGGCTTCTCCATTTACTCAAATTCATCCTTATCCAGAACTCCTTTCAACTTGCATTCTTCACCTGGACTTGGTATGAATTTGGTCCAAGGTCTTGCTTCAATCGAGAAAAAGAGGACATTGCCATAAGGATTGCCATGGGTGTAGCTGTGCAGCTCCTTTGTGGTTATGTGACACTGCCCCTTTATGCACTTGTTACTCAGATGGGTTCTAGCATGAGGAGAGAAGTTTTCACTGAGAGTGTCTCCAAGGGCCTCAAAAATTGGCACAAAAAGGCTAAACAATCTCTGTGTAAAAACAACTCAACTTCAAGCAAACACTCAAATTCTTTGCATTCCACAGTAGGTGAGAGTTCAATAAGAGGAGCAGTGGATAGTGTGCATAACCCAGATAATGTAGCAGTCACTAGCTATTCTTCTCCCCTCACCTCAGAGGTGGAAAAGAGAATTGCACCAACCCATGAGCAAGAGATGTCAAGTTCAGAAATCCCAACTATTGAGGAAGAGAATAACCCCAAGATCATCACCAGAGGAACCTATGACGGTGAGATCTCATTTGGGAGCAGCTGGAAGAATGTGGGAAGTAGCAGGGGAATTGGAGAATTTGGTTCAATAACTGAAGAAGATGATGCTGAAAAATTGTCTGAGTTGAATCCATAA 1722 0.403 MDIGKERTLEETPTWAVSVFCFFFLTISLIIEGGLHKLTEILRKRKGKSLGKALTKTKTEMMKFGFMSFLLTISEVPISKICITKDVANSLLPCKDAVDLTGLTSAPATRTSTSEFDIAPATNESTIEVNYCEAKGMVSLISSDGILQLNIFISFLAVFHILFCTLTMCLGKAKMRRWKRWEDETRTLEYQIANDPRRFQYTGQTLIGKRHLKFWSYHSPLLWMVCFFRQFYGSVSKDDYFTLRNGFIAANISLGSNFNFKKFLSRTYDEDFEKVMGIRIWIWIFSILFIFFSAHEFYNYYWLPFIPLVVALLAGAKLQVIITKMCVDSCKENPVIKGSLLVTPSDAHFWFHRPEWLLHLLKFILIQNSFQLAFFTWTWYEFGPRSCFNREKEDIAIRIAMGVAVQLLCGYVTLPLYALVTQMGSSMRREVFTESVSKGLKNWHKKAKQSLCKNNSTSSKHSNSLHSTVGESSIRGAVDSVHNPDNVAVTSYSSPLTSEVEKRIAPTHEQEMSSSEIPTIEEENNPKIITRGTYDGEISFGSSWKNVGSSRGIGEFGSITEEDDAEKLSELNP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01172 573 MobiDBLite consensus disorder prediction 477 523 - -
Cca04g01172 573 MobiDBLite consensus disorder prediction 557 573 - -
Cca04g01172 573 MobiDBLite consensus disorder prediction 484 500 - -
Cca04g01172 573 PANTHER MLO-LIKE PROTEIN 1 5 560 IPR004326 GO:0006952|GO:0016021
Cca04g01172 573 Pfam Mlo family 6 469 IPR004326 GO:0006952|GO:0016021
Cca04g01172 573 MobiDBLite consensus disorder prediction 547 573 - -
Cca04g01172 573 MobiDBLite consensus disorder prediction 450 469 - -
Cca04g01172 573 PANTHER MLO-LIKE PROTEIN 5 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01172 Cca-Chr4 13492739 13500390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01172 5 562 MLO family AT2G39200 42.958 4.40e-158 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01172 K08472 - gmx:100789563 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01172 04 13492739 13500390 Cca04g01172 04 13492739 13500390 ECH