Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01163 ATGCGGCACTTTATCACACTAGAATTTGTCTTATACATACAAATGCAAATAATCACTTTATTTTCTAATCCCTCCATCCACCATAGTTCTCTTGACGGCGTTCCACATTCTGGGACTTTATTATCTAGTGGATGTTCTTTTCTCAATGGGAATGAATCTGCACCTTATGGATATGGAATTCAAGgactttgtttgcttccaaataTTGTTAATGTAACTGCCAACATTCATAGTGGGGCTCACCCTATAACTCTGGTTGACAGCCCTCTAATGCCTTCTGACGGAAGGCTTATCCATGCAGAGGAATTATCAAGGTCTCAAAGGAAGCGAAAGAATGAAGAGGTGAGAATGCAACGGGGACTTGAAGTGCAAGAGAAAAAAATTAGAAAAGAGCTTCAAAAACAGGATATTCTAAGGCAAAAGAGAGAAGAGCAAATAAAGAAAGAGATGGAGAGGCATGAACGTGAAAGGCGGAAGGAAGAGGAAAGGTTATTGCGTGAAAGACGGCAAGAAGAAGAGAGGTACCAAAGAGAACAGAGGCGTGAACTGGAGCGACGAGAGAAGTTTTTACAGAAGGAATTAGCTGAGAAACTGAGACAGAAGGAAGAACTACACAGGGAGAAAGAGGCAACAAGGATCAAAGCTGCTAACAAGAGAGCTATTGCTCGCAGAATTGCCGAAGAATCTATTGAACTTATTGAAGATGAAGTCTAG 714 0.4006 MRHFITLEFVLYIQMQIITLFSNPSIHHSSLDGVPHSGTLLSSGCSFLNGNESAPYGYGIQGLCLLPNIVNVTANIHSGAHPITLVDSPLMPSDGRLIHAEELSRSQRKRKNEEVRMQRGLEVQEKKIRKELQKQDILRQKREEQIKKEMERHERERRKEEERLLRERRQEEERYQREQRRELERREKFLQKELAEKLRQKEELHREKEATRIKAANKRAIARRIAEESIELIEDEV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01163 237 Coils Coil 121 214 - -
Cca04g01163 237 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 25 236 - -
Cca04g01163 237 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 25 236 IPR044977 GO:0006357
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01163 107 236 Homeobox Transcription Factor Family AT5G44180 70.455 1.91e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01163 - - gmx:100797480 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01163 04 13373479 13375624 Cca04g01163 04 13373479 13375624 ECH