Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01148 ATGACCACCACAACGCTCAGCGACGCACCCCGTATCAATATCGCCGTCGACGCTCACCACGATCCTCTCTTACCCTTTCTCTGGTCTATCAGGAAAGCTCTAGAAGGTTCCAACAATCCCGCTCCGAATCTCACTTTATGCATATGTGGAATGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGGTTTGCCCAAGTATATAAGGCAACTGTCGACAGTGATCCTGACAATGTTGTTGCACTAAAGATACAAAATCCAGCATTCCCTTGGGAATTTTACATGTATCGTCAACTTGATCAGCGCATCTTAGATAGAGAGAGGTCAAGTTATGGTTTCGCTCAACAAATGCATCTCTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACATTACAGGATGTCATTAACTCATATGTGGTCATAGGAAAATCCATGGAAGAATTGTTGTGTATTTATTACACTATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCTATGGGTGACCTTACAGAAGATGGGTTCTTGGACCGAAGTGGTTCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGGGGGATCGATCTGCATCTCTTTCCAGATCACACAGTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGCAAATGCATATGGCATTTGTGCTATTGTCCATATGATGTTGCATAACTCGTATATGGAAATCGTCAAAAAAGAACAATCTGATGGGAGCTACGTGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACATTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCAATACCCCCACGATGATGATAGGAGGTTGCTGCAGGATTTGAAGAAGTCCTTCCAGGACTATATGGGCTCCAATCCGCAGCTTATAAAGAAACTGAAGGAGTTACTCTCAAAGCAAAGGGCTTCCTTGTGTTCTGCTTAA 1071 0.4304 MTTTTLSDAPRINIAVDAHHDPLLPFLWSIRKALEGSNNPAPNLTLCICGMKYHIKGCAGQGGFAQVYKATVDSDPDNVVALKIQNPAFPWEFYMYRQLDQRILDRERSSYGFAQQMHLYSDCSILICDYLANGTLQDVINSYVVIGKSMEELLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYAMGDLTEDGFLDRSGSWCDQGLCLVDWGRGIDLHLFPDHTVFKGDCRTSGFRCIEMLEDKPWKFQANAYGICAIVHMMLHNSYMEIVKKEQSDGSYVYLPRLPFKRYWNIELWKTFFTKMLNQYPHDDDRRLLQDLKKSFQDYMGSNPQLIKKLKELLSKQRASLCSA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01148 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Cca04g01148 356 PANTHER BUB1 KINASE, ISOFORM A-RELATED 50 355 - -
Cca04g01148 356 SUPERFAMILY Protein kinase-like (PK-like) 52 332 IPR011009 -
Cca04g01148 356 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 50 355 IPR015661 GO:0007094
Cca04g01148 356 Pfam Protein kinase domain 53 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01148 356 ProSiteProfiles Protein kinase domain profile. 53 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01148 356 SMART serkin_6 53 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g01148 356 Gene3D Transferase(Phosphotransferase) domain 1 51 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01148 Cca-Chr4 13164251 13183350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01148 52 272 CBL-interacting serine-threonine protein kinases AT2G26980 25.446 1.26e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Cca04g01148 Pkinase 6.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01148 K02178 - gmx:100802272 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01148 04 13164251 13183350 Cca04g01148 04 13164251 13183350 ECH