Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01127 ATGGCGTCTGGGTCCTCGGGTCGCGGCAACTCTGCCACCAAAGGCTTCGATTTCGCTTCCGATGACATCCTCTGCTCCTACGACGACTACGCCAACCGCGATTCTAGTTCCAACGGCAATCACGCCGATCCGGATTTTCACAAATCAAGGATGGCAAGGACATCAATGTTTCCTACTACGGCCTATAATCCACCTGAAGAATCTTTAAGCCAAGATGTGATTGTGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAATCTCATGCGGTTTCTTGAGGGAATTAGTTCCAGGCTATCACAGTTGGAATTATACTGCTATAATCTTGACAAATCTATTGGAGAAATGAAATCTGATTTAAATCGTGACCATGCGGAGCAAGATTCGAGGCTGAAATCTCTTGAAAAGCACCTCCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGATACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCGAGCCATTCACAGTCCAATGAGGAGAGATCTTCACCTACTACAGATCCTAAGAAAACTGATAATGCATCTGATGCAACCAACCAGCAGTTGGCTCTTGCCTTGCCTCATCAAATTCCCCCTCAACAGCAGCCTGCAGCACCCCCAACTCAACCTCCTGCACAAAATGTGACTCAAGCCCCTCAACAGCCTCCTTATTACATGCCACCCACCCCTCTGCCGAATCCAGCCGTGGCCCAGCACCCCCAGAACCAGTACCTACATTCTGATCAACAATATCGAACACCCCAAATTGTGGCTCCACAACCAGCACCATCTCAAGTGACCCCATCCCCAGCTGTGCAACAATTTTCTCACTATcagcagccacagcaacatccacagccacagcagccgcagcaacaacaacaatgggcacagcaggtgcaacCTTCACAGGCACCCCCAATGCAATCTCAAGTAAGACCTCCCTCTCCATCTGTGTACCCACCATACCAGCCAAATCAAGCAACAAACCAATCACCTTCAGAAACACTGCCAAACAGCATGACCATGCAAATGCCATATTCAGGAGTTCCACCACCAGGTTCTAGCCGAGATGCCATGACATATGGATATGGAGGAGCTGGCAGAACAGTTCCACAGCAACCTCCACCCCAGCAGATGAAGGGCTCTTTTCCTGCACAGCCAGGTGAAATGTATGGACCTACCGGGAACCTCTCAGCGCTTCCTCCTCCTAGTAGTGCATACATGATGTATGATGGTGAGGGAGGAAGAACACATCATCCACCCCAACCACCATCTCATTTTGCTCAACCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCCCCAGGTCACAATCTTATGGTCCGGAATCCGAACCAGTCGCAATTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTGGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAACTCAGTACTTGACAGGTTGAATGTGCATGGCTCTGTGGGTCCACAGAGAGGATGGTCTGGGTGA 1602 0.4632 MASGSSGRGNSATKGFDFASDDILCSYDDYANRDSSSNGNHADPDFHKSRMARTSMFPTTAYNPPEESLSQDVIVTVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSDLNRDHAEQDSRLKSLEKHLQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASDATNQQLALALPHQIPPQQQPAAPPTQPPAQNVTQAPQQPPYYMPPTPLPNPAVAQHPQNQYLHSDQQYRTPQIVAPQPAPSQVTPSPAVQQFSHYQQPQQHPQPQQPQQQQQWAQQVQPSQAPPMQSQVRPPSPSVYPPYQPNQATNQSPSETLPNSMTMQMPYSGVPPPGSSRDAMTYGYGGAGRTVPQQPPPQQMKGSFPAQPGEMYGPTGNLSALPPPSSAYMMYDGEGGRTHHPPQPPSHFAQPGYPPTSASLQNPPGHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHGSVGPQRGWSG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01127 533 MobiDBLite consensus disorder prediction 214 250 - -
Cca04g01127 533 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 531 - -
Cca04g01127 533 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
Cca04g01127 533 MobiDBLite consensus disorder prediction 274 371 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 213 253 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 323 337 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 165 197 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 429 467 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 447 467 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 338 361 - -
Cca04g01127 533 MobiDBLite consensus disorder prediction 282 322 - -
Cca04g01127 533 Coils Coil 117 167 - -
Cca04g01127 533 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01127 Cca-Chr4 12841309 12846919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01127 478 519 Trihelix Transcription Factor Family AT3G01560 40.476 6.55e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01127 - - gmx:100782994 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01127 04 12841309 12846919 Cca04g01127 04 12841309 12846919 ECH