Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01120 ATGGAGAATGCGGCGATTGTGGAGCTAAATAGAAACTGTGCCAAGACAGTGGAAGAGATAGTGAAAATCGAGAGAAAAATCTTTCCCAAACACGAATCTCTGGCTTCATTCTTTCACGATGAACTCAGAAAGAAGAACAGTGGGTTGCTTTATCTTCACATTGATGGCCAACTTGCAGGCTATGTCATGTATTCTTGGCCTTCTTCCATGTACGCCTCCATCACCAAGCTCGCAGTGAAGGAGCAATGGAGGAGGCAAGGCCATGGAGAGGCTCTGTTGAGAGCAGCAATTCAGAAATGCAGAACAAGGAAAGTTTCTCGCATAATGCTTCATGTGGATCCCTTGAGGACTCCTGCTGTGAGTCTTTACAAGAAACATGGTTTCAAAGTTGACACTTTGATTGAAGGCTACTACTCCTCTGATAGAGATGCGTATAGAATGTACTTGGACTTTGATTCCAGCTGA 465 0.443 MENAAIVELNRNCAKTVEEIVKIERKIFPKHESLASFFHDELRKKNSGLLYLHIDGQLAGYVMYSWPSSMYASITKLAVKEQWRRQGHGEALLRAAIQKCRTRKVSRIMLHVDPLRTPAVSLYKKHGFKVDTLIEGYYSSDRDAYRMYLDFDSS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01120 154 Pfam Acetyltransferase (GNAT) family 19 128 IPR000182 GO:0016407
Cca04g01120 154 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 151 IPR016181 -
Cca04g01120 154 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 152 IPR000182 GO:0016407
Cca04g01120 154 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 153 - -
Cca04g01120 154 Coils Coil 6 26 - -
Cca04g01120 154 Gene3D - 6 150 - -
Cca04g01120 154 CDD NAT_SF 54 111 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca04g01120 Acetyltransf_1 7.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01120 - - gmx:100808090 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01120 04 12693293 12694694 Cca04g01120 04 12693293 12694694 ECH