Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01112 ATGAAGTTTCTCTTTGAAAAACTTTTTCCTCAATTGCCTCTAGTCCTTCTTTGTTGTTTGGTTAGGGTTATAATCTCAGAACATGTTAGTGATGTGAATCTACCAAACAATGAAACTGTCCCAGCAGTGATGGTGTTTGGGGATTCAATAGTGGATACGGGTAACAACAACTACATCACCACCATAGGCAAATGCAATTTCCTACCATATGGCAGAGATTTTGGTAAAGGAAATCAAGCAACAGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGACATCATTGCTGCAAAATTTGGAGTAAAAAATCTTTTGCCACCTTATCTTGACCCAAAACTGCAACCTGAAGATCTCCTTACAGGTGTAAGCTTTGCATCCGGTGCTGCTGGATATGATCCTTTAACTTCTAAAACAGCATTAGTGCTATCATTATCGGATCAACTAGACAAGTTCAAGGAATACATACAGAAGATAAGTGGAACAGTTGGAGAAAACAGAACAGCAACAATATTATCAAAAAGCATATACATCTTGTGCATTGGAAGTAACGACATTACCAACACTTACCCTTTGTTTAGGCGATTACAATATGACATTCAAGCATACACCGACTTAATGGCTTCATATGCCACAAAGTTCTTGCAGGAGCTTTATGGACTAGGAGGTAGAAGGATTGGAGTAGTTAATTTACCGGTTATAGGGTGCGTGCCCTCACAGAGAACATTACACGGAGGCAAACAAAGAAATTGTTCAGATTTTGAAAACCAAGCCGCAATCATATTCAACACCAAACTCTCATCTCTCATAAATAACCTTACAAAAGAGTTTCCAGATGCTAGACTTGTCTACCTTGACATTTACAACCAATTACTCAATTTGATTCAAAAGCCGGCAACATATGGTTTTGAAGTAACAGACAAAGGATGTTGTGGCACGGGAAATATTGAAGTAGCCATATTGTGCAACCCTCTTACTCAGAACATATGTCCAAACACCTCAAACTACATATTCTGGGACAGTTTCCATCCTACAGAAGAGGCCTATAAAGTCATTTGTTCTGAGGTGATTGACAACAAAATTAAGGACTTTTTCTAA 1092 0.3864 MKFLFEKLFPQLPLVLLCCLVRVIISEHVSDVNLPNNETVPAVMVFGDSIVDTGNNNYITTIGKCNFLPYGRDFGKGNQATGRFSNGLVPSDIIAAKFGVKNLLPPYLDPKLQPEDLLTGVSFASGAAGYDPLTSKTALVLSLSDQLDKFKEYIQKISGTVGENRTATILSKSIYILCIGSNDITNTYPLFRRLQYDIQAYTDLMASYATKFLQELYGLGGRRIGVVNLPVIGCVPSQRTLHGGKQRNCSDFENQAAIIFNTKLSSLINNLTKEFPDARLVYLDIYNQLLNLIQKPATYGFEVTDKGCCGTGNIEVAILCNPLTQNICPNTSNYIFWDSFHPTEEAYKVICSEVIDNKIKDFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01112 363 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Cca04g01112 363 SUPERFAMILY SGNH hydrolase 173 355 - -
Cca04g01112 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 362 - -
Cca04g01112 363 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Cca04g01112 363 Pfam GDSL-like Lipase/Acylhydrolase 43 351 IPR001087 GO:0016788
Cca04g01112 363 Gene3D SGNH hydrolase 28 359 IPR036514 -
Cca04g01112 363 PANTHER GDSL ESTERASE/LIPASE EXL3 2 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01112 Cca-Chr4 12627318 12632132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01112 37 357 Pollen Coat Proteome AT1G75910 39.939 3.53e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01112 - - gmx:100809562 552.362