Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01091 ATGGCGAACGGGTTAGAGAGAGAAAGTGGGTTGACGTTGTTCAGCGAAGAGGAGCTGAGGGAGGTGAGTGGGGTGAAGCGTGTTGGGGACTATGTTGAAGTCACGTGCGGGTGCACGAGCCATAGATATGGTGACGCTGTTGGAAGACTTAGGGTTTTCGTTAATGGGTACCTTGAAATCACTTGTGAATGCACCCCTGGGTGTCAGGAAGACAAATTGACTCCTTCTGCATTTGAGAAACACTCTGGAAGGGAGACAGCCAGGAAATGGAAGAATAATGTCTGGGTAATAGTAAATGGTGAGAAGGTTCCACTGTGTAAAACAGTGCTGCTCAAATACTACAATCAAGTGTCAAAAGCTGCAAATGGATCCCATAGATCCCAAAATGGCCGAGCTTGTCACCGTGATGAGTTTGTTCGCTGCACTAGGTGCAATAAAGAGCGTAGGTTTCGTCTGAGGACAAAAGAGGAATGCCGCATTCACCATGATGCTTTGGCAGATGCAAATTGGAAATGTTCAGATCTTCCATATGACAAAATTGCTTGTGATGATGAAGAAGAAAGAGCAAGTCGTAGAGTTTACAGGGGATGCACTCGATCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATATCTGCCGCTTTTCAGATTGCAGCTGCCAGACTTGTGCTGACTTTACAAACAATGCCAAAGCTTGA 711 0.4613 MANGLERESGLTLFSEEELREVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSQNGRACHRDEFVRCTRCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDKIACDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01091 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 - -
Cca04g01091 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Cca04g01091 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01091 Cca-Chr4 12198127 12203099 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Cca04g01091 SAND 0.0001 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01091 - - gmx:100796203 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01091 04 12198127 12203099 Cca04g01091 04 12198127 12203099 ECH