Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g01050 | ATGGAATTGACGAGACCCAGTTATGCTGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAAGAGGGGAAAGAAGAGGAGCATTTTAGAGATGGTGGAGCTTTATCATCATCCATTTATGTGCATGGAATAAAGGTAGAAAATGAATGGAAACAGTGTAGGAAAGAATTGATAGAGAGGATCAATGATGCCAAATATATTGACTTGCATCAGCTGGAAGGGAGCAGTGACGTGAAAACTAAAAAAAACAGCATACATAGAGAAAAAAAGTCTCTGCCTCTCCATATAAAAAGAAAAACTTTGGACTGCATAAGAATGAGTACCACTCCTGCTCCTGTTTCAGAAAAAGGTAGCTCTAGATATTTGTTGACAAAGGACTCTGAATCAACCTTGGGGCTGGAAAGTGGTCATGGGAGAAATTTGATTGCTGATTCACCACATGATCAAATGGCACCAACTCCTTCTAATGCTGAATCACCAACACCAAATCATGGTCCAGCACAATCCAATTCTCAACCATCACCAACACCAAATCATGGTCCAACACCATCTAATTCTCCACCATCACCAACTCCTTCCAAAGGTCTGGATTTACTCCCTCCAGATATGTTTGTGCCATTTCCACCACCACCACCTCGTGCTCCTCCTAAAAGTTCTCGACCTAAAGTATATTCTCCTGTTCCTTCACCACCCAACGATGATGGCAAAACGAAGCAAACTGTTCATTCATCACCAAACAATGATGACAAAAAGAAGCAATCAATTATGATAGCTGCCGCTGTATCAGGATTTATAGTCTTGATAGCCTTGGTCCTCTGCTGTCGAGAGGCCAGAAAGAACAAAGGTGACAGAGAAGACCGCCCTTTGCTCGTGTTAACCTCAAATGATTATTCTGGTGGTTCAAAGAAGATTGTTCGATTGGGAGATGCTGACATGGAAGAATCTGACAATGATAAAACCCCTTCTAATGTTAGAAATTGGTCCGTGAAGTTTGAAAATAAGGATGGAAACAAGGGTGGAAACAAGGGTGGAGATAAGGGTGAAGATAACAATGTCTCACTTGATAAGACAACAGTATCAGAAGCTGTAGGACAAGCACCAGAGCCTGCTAATGGAGAAGCTGCCcctccaccccctggaccaccaccaccaccaccaccacTGGCTCCACGGGCGCCACCGCCTCCTGCTCCTCGTGCGCCGCCACCTCCAAGAGGAGGAGCTCATCCTCCACCCGCTCCTCCCAAACCATTGGCAGGTAAGAAACAAGGACCACTCCATGCTAAAGAAGGAAGTTCAAGTGAAAATGATGCTGCTCCAAAACCAAAACTAAAGCCATTTTTTTGGGATAAGGTTAATGCAAAGCCAGGCCAATCAATGGTGTGGCATGAGATCAGTTCAGGATCATTCGTGATCAACGAGGAAATGATGGAGTCTTTATTTGGCTGCACCAACCAGAACAAGAATGAACGCAAAAAAGATTCACCATCTTTAGATACGTCAGTGCATTATATTCAGATTATTGACCCTAGAAAAGCACAGAACTTATCAATTCTTTTGAGAGCGCTGAATGTGACTACAGCAGAAGTCGTTGATGCTCTTACAGAAGGTAACGAGATTCCTGTGGAGCTCATCCAGACGTTGTTGAAGATGGCACCTACACAAGAAGAGGAACTGAAGCTTAGGCTATTCACAGGACAACTACATGAACTAGGACCAGCAGAGAGGTTTCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATGTCTCATGTTCATGTTTATCCTTCAAGAAGAGTTCCAAAGCATTAAGGACTCCTTTGCCACATTAGAGGTTGCGAGCAACGAGCTGAGAAAAAGCCGTCTATTTCTAAAACTCCTAGAAGCAGTTCTGAAAACCGGCAACCGCATGAACTCCGGAACGTACCGCGGTGGCGCACAAGCCTTCCGCCTGGACACCCTCCTGAAGCTGTCGGACGTGAAAGGAACCGACGGCAAGACCACCCTCCTCCACTTCGTGGTGCAGGAGATCATCCGCTCGGAGGGAATCCGCGCCGTGCGATCCGAGAGAGCCACCGAGAGAGCGAGCAGAAGCATCTCCAGCGCGGGAAGCGACTCCGACGAGGGCACGGAGGACACCGAAGAACAATACCGCAGCCTCGGCCTGCAAACGGTCTCGAGCCTCAGCAACGAGCTCAGCGACGTGAAGAAGGCGGCACTGATCGACGGCGACGCGCTGACGACGGCGGTGTCGAAGCTAGGGCACTCCCTGCTGAGGACCGAGGAGTTTCTGAAGACGGACATGAAGAACATCGAGGAGGAGAGCGAGTTCCGGAGCAGCGCGGAGAGCTTCGTGGTGAAGGCGAGGGGGGAGGTGACGTGGCTGGTGGAGGAGGAGAAGAGGATCATGGCGCTGGTGAAGAGTACTGCGGATTATTTCCACGGGAACGCGGGGAAGGACGAGGGTTTAAGGTTGTTTCTCATCGTTCGTGATTTCTTGATCATATTGGACAAGGTGTGCCAGGAGGTCAGAGAGACCACCATCAAGTTGGCAAAGGCTGCCAGTACTATCAGCAAGAAGGACCCCGATGCTGCTTCCGTTGCCTCTTCCCCCGACGCCCATAGCCACCACTCTCCGCCGCCGCAGAAGCCTACTGACCTCCATAGAAGGCTGTTTCCGGCTATTGCAGAGCGGAGAGTGGACTACTCTAGCTCAGATGATGACAACGACGATTGA | 2766 | 0.4779 | MELTRPSYAVVYVILLCALAQGGSEGKEGKEEEHFRDGGALSSSIYVHGIKVENEWKQCRKELIERINDAKYIDLHQLEGSSDVKTKKNSIHREKKSLPLHIKRKTLDCIRMSTTPAPVSEKGSSRYLLTKDSESTLGLESGHGRNLIADSPHDQMAPTPSNAESPTPNHGPAQSNSQPSPTPNHGPTPSNSPPSPTPSKGLDLLPPDMFVPFPPPPPRAPPKSSRPKVYSPVPSPPNDDGKTKQTVHSSPNNDDKKKQSIMIAAAVSGFIVLIALVLCCREARKNKGDREDRPLLVLTSNDYSGGSKKIVRLGDADMEESDNDKTPSNVRNWSVKFENKDGNKGGNKGGDKGEDNNVSLDKTTVSEAVGQAPEPANGEAAPPPPGPPPPPPPLAPRAPPPPAPRAPPPPRGGAHPPPAPPKPLAGKKQGPLHAKEGSSSENDAAPKPKLKPFFWDKVNAKPGQSMVWHEISSGSFVINEEMMESLFGCTNQNKNERKKDSPSLDTSVHYIQIIDPRKAQNLSILLRALNVTTAEVVDALTEGNEIPVELIQTLLKMAPTQEEELKLRLFTGQLHELGPAERFLKVLVDIPFAFKRLECLMFMFILQEEFQSIKDSFATLEVASNELRKSRLFLKLLEAVLKTGNRMNSGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRSERATERASRSISSAGSDSDEGTEDTEEQYRSLGLQTVSSLSNELSDVKKAALIDGDALTTAVSKLGHSLLRTEEFLKTDMKNIEEESEFRSSAESFVVKARGEVTWLVEEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCQEVRETTIKLAKAASTISKKDPDAASVASSPDAHSHHSPPPQKPTDLHRRLFPAIAERRVDYSSSDDDNDD | 921 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 337 | 358 | - | - | |
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 182 | 201 | - | - | |
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 372 | 448 | - | - | |
| Cca04g01050 | 921 | Gene3D | Formin, FH2 domain | 446 | 877 | IPR042201 | - | |
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 870 | 900 | - | - | |
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 377 | 425 | - | - | |
| Cca04g01050 | 921 | Pfam | Formin Homology 2 Domain | 443 | 846 | IPR015425 | - | |
| Cca04g01050 | 921 | PANTHER | FORMIN-RELATED | 1 | 919 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
| Cca04g01050 | 921 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - | |
| Cca04g01050 | 921 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 440 | 872 | IPR015425 | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca04g01050 | - | - | gmx:100816477 | 719.153 |
Showing 1 to 1 of 1 entries