Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01036 ATGGGAAGCCAGAGTTACTTGAAGGTTTTGGTTATTTGTCTCATAGCAGCATTACTTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCTAAAAGCTGTCCAAAGGCTGAACAAATCATTTTCAACTATGTTGTTGAGCATGTCCACAGAGTTCCATCACTAGCAGCTGCCCTCGTTAGACTTCATTTCCATGATTGTTTTGTCCAGGGTTGTGATGCATCAGTGCTACTGAACTCAACGAAAAACAACCAGGCTGAAAAGGACTCTATTCCAAATCTTACACTTCGAGGCTTTGACTTCATTGAAGGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATGTCTTAGCTTTGAGCGCCAGAGACTCTATTCATGCCATTGGTGGACCCTACTGGAATGTTCCAACAGGTCGAAGGGATGGATTAATCTCTAGAGCAACAGATCCATTAGTTAGCCTTCCTGCTCCATTCCACAACCTCACCACCCTCTTATCACGCTTTGCCAATGTTGGACTTGATGTAAACGACCTTGTCTTGCTTAATGGTGCTCACACAATTGGGATCGCACATTGCTCTACAATTGCAAATCGTCTATACAATTTTACTGGCAAGGGTGACACAGACCCAAATCTAGACAGTGAATATGCAAAAAATCTAAAGACATTAAAGTGCAAGAATATCAATGATAAAACTACACTTATTGAGCTGGACCCTGGAAGTCGTGATACATTTGATCTTGGCTTTTACAAACAAGTGGTTAAAAGAAGGGGCTTGTTCCAATCAGATGCTGCATTGCTTGATAGCTCCATCACAAGGTCTATTATCGCCAAACAACTTCAATCAACTCAAGGATTCTTTGTGGAGTTTGCCAAGTCCATAGAGAAAATGGGTAGAATCAATGTCAAGATTGGAACAGAAGGAGAGATAAGGAAACATTGTGCACGAGTGAACAACTAA 981 0.4179 MGSQSYLKVLVICLIAALLGSTQAQLQLGFYAKSCPKAEQIIFNYVVEHVHRVPSLAAALVRLHFHDCFVQGCDASVLLNSTKNNQAEKDSIPNLTLRGFDFIEGIKSLVEAECPGVVSCADVLALSARDSIHAIGGPYWNVPTGRRDGLISRATDPLVSLPAPFHNLTTLLSRFANVGLDVNDLVLLNGAHTIGIAHCSTIANRLYNFTGKGDTDPNLDSEYAKNLKTLKCKNINDKTTLIELDPGSRDTFDLGFYKQVVKRRGLFQSDAALLDSSITRSIIAKQLQSTQGFFVEFAKSIEKMGRINVKIGTEGEIRKHCARVNN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01036 326 Gene3D Peroxidase, domain 2 162 304 - -
Cca04g01036 326 PANTHER PEROXIDASE 25-RELATED 3 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cca04g01036 326 Pfam Peroxidase 50 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PANTHER PEROXIDASE 3 325 - -
Cca04g01036 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Cca04g01036 326 Gene3D - 29 325 - -
Cca04g01036 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01036 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01036 Cca-Chr4 11318596 11320919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01036 14 326 Peroxidase AT1G05260 59.554 7.49e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01036 K00430 - gmx:547504 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01036 04 11318596 11320919 Cca04g01036 04 11318596 11320919 ECH
Cca10g00729 10 8307894 8309659 Cca04g01036 04 11318596 11320919 PCT