Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00990 ATGTCTAACACATCAGATTCCAATAAGATCACCCTAGTAGAAGAGTGTCGTGGCGTTCTTCACGTTTACAGCGACGGTTCCATAGTACGCTCTTCACGTCCAAGCTTCAACGTCCCCGTCAACGACGACGGCACCGTTTTCTGGAAAGATGTCGTTTTTGATCCTTCCCATGATCTTCAGCTTCGGCTCTATAAGCCAGCCGATTCAGCCGGCTCAAAACTTCCAATTTTCTTCTACTTTCACGGCGGCGGCTTCTGCATCGGCTCGCGCACTTGGCCTAACTGTCAAAACTATTGTTTTCGGCTTGCTTCTCAGCTCCAAGCCGTAGTCGTTGCCCCGGACTATCGGCTCGCTCCCGAGAATCGGCTCCCCACTGCAATTGAGGACGGCTTTGGAGCTCTAAAGTGGCTTCAAACTCAAGCCGTGAGTAATGAGCCGGACCCTTGGTTGAGCCACGTGGCTGATTTTAGCCGCATCTTCATTTCAGGTGACTCGGCTGGAGGAAACATAGCTCATCACTTGGCGGCTCGGCTTGGGTATGGCTCGCCTGAGCTGGCTCCTGTTCGAGTCAGGGGTTATGTTCTATTAGCTCCTTTTTTTGGTGGAACAATCCGAACCAGATCAGAAGTTGAAGGACCAAAAGATGCTTTTCTCAACTTAGAACTTATTGATAGGTTTTGGAGGCTTTCTATACCAGTTGGGGACACTACTGATCACCCTTTTGTGAATCCGTTTGGGCCAAATAGTGAGAGTCTCAAAGCAATTAATCTTGACCCAATTCTAGTGGTGGCTGGAGGAAGTGATCTGCTTAAAGATAGGGCAGAGGACTATGCAAGGAGGCTTAAGGAGTGGGATAAAGATGTAGAGTATGTAGAATTTGAAGGACAACAACATGGGTTCTTCACCATTGATCCCGATTCAGAACCATCCAACAAGTTGATGTTGATCATCAAACAATTCATAGAGAAGTGTTTGGGGAAAAATTGA 987 0.4772 MSNTSDSNKITLVEECRGVLHVYSDGSIVRSSRPSFNVPVNDDGTVFWKDVVFDPSHDLQLRLYKPADSAGSKLPIFFYFHGGGFCIGSRTWPNCQNYCFRLASQLQAVVVAPDYRLAPENRLPTAIEDGFGALKWLQTQAVSNEPDPWLSHVADFSRIFISGDSAGGNIAHHLAARLGYGSPELAPVRVRGYVLLAPFFGGTIRTRSEVEGPKDAFLNLELIDRFWRLSIPVGDTTDHPFVNPFGPNSESLKAINLDPILVVAGGSDLLKDRAEDYARRLKEWDKDVEYVEFEGQQHGFFTIDPDSEPSNKLMLIIKQFIEKCLGKN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00990 328 PANTHER CARBOXYLESTERASE 15-RELATED 10 322 - -
Cca04g00990 328 SUPERFAMILY alpha/beta-Hydrolases 38 326 IPR029058 -
Cca04g00990 328 Pfam alpha/beta hydrolase fold 78 301 IPR013094 GO:0016787
Cca04g00990 328 PANTHER ARYLACETAMIDE DEACETYLASE 10 322 - -
Cca04g00990 328 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 IPR033140 -
Cca04g00990 328 Gene3D alpha/beta hydrolase 20 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00990 Cca-Chr4 10738518 10740211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00990 12 303 Carbohydrate Esterase AT1G68620 37.458 2.52e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00990 - - gmx:100801391 582.022