Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00981 ATGGACGTTGATTCCTCGATGGTGCCGGAGGCCGATCACGATCCGGCAGCGCAGAACCATGCCGAGAGAGACCAGCTAGGGGAGTCGCCGTCGTCGCCGCCGTCCGGAGGCGGATCTCCGGCTCAGTTGCCGGCGCAACAACAGCAACAGCCGCCGCCGGCGACGGCGGCTCAGGTGCAGCACAGTCCGGTGGTTGGTCCGAGGCTCGCGCCGACTTATTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGACGGGCCAGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGCCAGGGTACATTGGTCCGAGGTTGATTTTGTTCGGCGGTGCCACTGCTCTTGAAGGGAATTCCGCGGCCTCAGGGACTCCTTCGTCCGCTGGAAATGCTGGCATACGTTTGGCTGGTGCCACTGCTGATGTCCACTGTTATGATGTCATAACTAATAAGTGGTCTAGGATAACTCCCATTGGTGAGCCTCCAACTCCAAGGGCTGCACATGTTGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGGCCTGCTGGTTTGTCTGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGACCTCGGTGGCATAGAGTTGGTGTTCCAGGCCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTAGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCTAGTGCACGTTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGACGCCAATAGTGTTCCTTTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCCATTGCCCCTGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGAGGAGGACGGATGGTTGAAGATTCGTCGAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAGTTGACCCGGCGTTGTAGGCATGCTGCTGCTGCTATTGGTGACTTGATTTTTATTTATGGTGGTTTACGTGGCGGGGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAACTGCTGCATCACATGCTGCAGCAGCAGCTGCATCTAATGCACAAGCGGGACGACTACCTGGGCGGTATGGATTTGTTGATGATAGGACAAGGCAAACCATGCCTGAAGCAGTTCCTGATGGTTCAGTTGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGCGACATGTATACCGATATCAGCACTGAAAATGCCATGCTCCCGGGTTCTCGGCGAACTAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCGGAAGCTGAGGCTATCAGTGCAACACTTGCTGCTGCCAAGGCACGACAAGTGAATGGTGAAGTTGAGTTGCCTGACCGAGACCGTGGGGCAGAGGCAACACCTAGTGGGAAACAAATATCTTCTTTGATTAAGCCTGATTCTGTTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCGGAAAGTGCAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCGAAGAAGGTTGTAGCTCACCTCTTAAAGCCTCGCGGGTGGAAACCACCAGTTCGCAGGCAGTTTTTTTTGGACTGCAATGAAATTGCAGATCTCTGTGATAGTGCAGAACGCATATTTTCAAGTGAACCAAGTGTCTTAAAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGACAATTTGGAGATCTTATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATTGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTAGAAACTATTACCCTTTTGCTTGCTCTGAAGGTTGAGTATCCGAACAATGTACATTTAATACGGGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAATGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGTATAAATCGTCTGTTTAATTGGCTTCCTCTGGCAGCACTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAACCATGTGGAACAAATTGAGAATATTCAGCGCCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGTCTGCGGCCAAATGCCAGGGGTCCAGGATTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCGCACGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTCTCTGCTACAAACTACTGCGGTACCGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCGTTACCACCTGCAATTTCTTCACCAGAAACGTCACCGGATCATATCGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAGCAAATGACCGAGGTTCTCTTGCTTGGATATAG 3009 0.4998 MDVDSSMVPEADHDPAAQNHAERDQLGESPSSPPSGGGSPAQLPAQQQQQPPPATAAQVQHSPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVITNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAASNAQAGRLPGRYGFVDDRTRQTMPEAVPDGSVVLGNPVAPPVNGDMYTDISTENAMLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSVGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLKLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPDHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00981 1002 MobiDBLite consensus disorder prediction 978 1002 - -
Cca04g00981 1002 MobiDBLite consensus disorder prediction 1 62 - -
Cca04g00981 1002 Gene3D - 636 967 IPR029052 -
Cca04g00981 1002 SUPERFAMILY Kelch motif 145 434 IPR015915 GO:0005515
Cca04g00981 1002 MobiDBLite consensus disorder prediction 550 580 - -
Cca04g00981 1002 MobiDBLite consensus disorder prediction 564 578 - -
Cca04g00981 1002 CDD MPP_Bsu1_C 652 954 IPR041758 -
Cca04g00981 1002 MobiDBLite consensus disorder prediction 24 57 - -
Cca04g00981 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1002 - -
Cca04g00981 1002 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 836 863 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Cca04g00981 1002 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Cca04g00981 1002 SMART pp2a_7 672 956 IPR006186 GO:0016787
Cca04g00981 1002 Pfam Galactose oxidase, central domain 225 278 - -
Cca04g00981 1002 Gene3D - 67 268 IPR015915 GO:0005515
Cca04g00981 1002 Gene3D - 269 459 IPR015915 GO:0005515
Cca04g00981 1002 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Cca04g00981 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1002 - -
Cca04g00981 1002 Pfam Kelch motif 331 377 IPR011498 GO:0005515
Cca04g00981 1002 SUPERFAMILY Metallo-dependent phosphatases 658 963 IPR029052 -
Cca04g00981 1002 PIRSF STPPP_BSU1 37 1002 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00981 Cca-Chr4 10601547 10616353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00981 664 899 Calmodulin-binding Proteins AT5G63870 29.044 1.25e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00981 - - gmx:100788485 1817.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00981 04 10601547 10616353 Cca04g00981 04 10601547 10616353 ECH
Cca10g00675 10 7474250 7486334 Cca04g00981 04 10601547 10616353 ECH
Cca10g00675 10 7474250 7486334 Cca04g00981 04 10601547 10616353 PCT