Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00974 ATGGGGTTTTTGCTGAAAGAGGCTTTGAGGACTCTGTGCTCAAGGAATCGTTGGTCTTATGCCGTCTTCTGGAAGATCGGTTGCCACAATTCCAAGCTGTTAATCTGGGAAGATTACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAGCTGTTGGGATGTCTAATTTTCCTCGCCGAGATGGGGAAGGATGTTGGTTTTCTTCTGAGTCTCAGCTAGGGATTCAGGAGGAGGACAGAGTCTGTGTATTGCTTAACAAGATGATGGTGAATAATTCAGGAGGAGGACAGAGTCTGTGTGTTGCTGGAGAAGGGATAGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCATATCCACCAGAGGTATATCCCGAGTTGCATTACCAATTTTCATCTGGAATGCAGACGGTAGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAATTTGGTTCTTTCTTGCCAATAATGGAAGATATGGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGAAGTGTACCTGGCGCCCTTTTATCTGAAGATTATTCAGCAAAAGTTTCTAATGAAAAATTTGCTGGACCTATGACCTTTGATCCACCGGTCATTACTTCAAACTGCACTCCCTCAGCAGCTAATGGTTCCAACCAACTAACTAATTCTACTCTTGCTTCAAGGTCCATTGCTCAGCCACCTCACCCTCTAAGGGGAGAAATAAATAATTTCCACGGTTCTGTATTGACACCTCGAACCATTGACTCGAACCAGATATTTGATAGCATTTGCCAGCCAAAGGTTCATTCAATGATCAAAGCAAATGTCTGTGGCCAACAGAAGAAAGTTGTGGAGGCTGAAGCTAAAGTGATACCTTCAAATTTTGATTCATGTCTGCAGCAGCATTCTGTTTATAATGCTAGATCTGCATTCAACGAATTAGCTTTCAATCAATCAAATCTTAGTGAACGTAGCCTTAAATATATGGAACAACAAACATCAGGTGTTGGGAGACAGAATCATGTTAATCCTAACATGAATCCATCGAGTGCCTTAAATATGCCTCAAATGAAAACTGATGGAGGCCAAATTCTTGAACAGAGTCAGAGTTCTGGTAGCACTTCACTACTTGGAGGAATCCCAATATGCAGTGGGAGTAATCTTTTGAGGACGAATATGATTAGCTGCTCAGTTTCAAATCCTCCCAGAGTATCCACTTCTGATTTCCGTGGAGCACACAGGGTTGGGTTTGGACTTCAAAATAACAATTCAACAACTAATGCTGGGCTTTGCTCTGTGCCCAATTTCACTAATCCATCTGTTACCAGTCACATGAATATAGAAGGCTCTGGTCAGAAGAATCTTCCAATTGATTTAAAGAATGCTTGTAATGCTTTGGCTTCAACTGATCAAAGGATAGATGATGATATGCTTCAGGCCCTTAAGATTCCATCTCTTCATCTTGAGGAGCATGTGCCTATGGGCGATCACATCCCTGGTTTTGTCCTCAATAAAGATGTTACTAGTCAACATATGAAAATGAATGTTAAGCACGAGGAAGCCTATACTCAACTTCCATCTGGTGATGACCTCTTTGATGTTTTAGGTGTGGATTTCAAAAGGAGACTGCTCAATGGAAACTTGGATAAGCTGCTTGCCACTGATTCAGATGCCAATGCAGGACATCTAGATAAAAAAGCAACATGCATGAATTTGCAAGGTGTAGATCATGATAATAGTTACACTGTTAGTGAAGCAATATCAGACAGTGGCATCTTCTCTGGAATGGGCACTGACCACCTCTTAGATGCTGTGGTATCAAAAGCTCAATCTGCTGCAAAACAGAATTCTGATGAAATGTCTTGCAGGACAACGTTGACAAGGATTAGTACTGCCTCCGTTCCCTCTCCTTCGTGCAAGCAGGTTATGTCTGATCATGTTGTCCAAAGGGGATTGTTTGATTTTCCCAAGACCGGAACTAAAACAGCTGCTGCAGAAACAAGTTCTCTTAGGTCAGGGTGTAGCAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCATATATGGCTCTAAGCTTAGTTCATGGGTTGAGAATGGCAGTAATGTGAAACGTGAAAGTAGCGGTTCAACTGGATACTCCAAGCGACCAGATGAAGTTTGCAAATCAAATCGTAAAAGACTTAAACCTGGAGAGAACCCTAGGCCTCGGCCCAAAGATCGCCAAATGATTCAAGATCGTGTGAAGGAGTTACGGGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCTCTTCTGGAAAAGACTATCAAGCACATGCTTTTCCTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAGCAGACAGGGGAGTCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTCTGTCCTATTATTGTTGAGGATCTTAATCCTCCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGTTTAGGCTTAACCATCTTAAAGGGGGTCATGGAAGCTCGCAATGACAAGATTTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACGAGGATGGAAATATTCATGTCGCTGGTTCGGCTTTTGGATCAAACCGTGCGAACGCAGTTGATAACAACATGA 2775 0.4263 MGFLLKEALRTLCSRNRWSYAVFWKIGCHNSKLLIWEDYYYEPLPSPFPPRAVGMSNFPRRDGEGCWFSSESQLGIQEEDRVCVLLNKMMVNNSGGGQSLCVAGEGIVGRAAFTGNYQWILLNNFTRDAYPPEVYPELHYQFSSGMQTVAVIPVLPHGVVQFGSFLPIMEDMGFVNDVKNLILQLGSVPGALLSEDYSAKVSNEKFAGPMTFDPPVITSNCTPSAANGSNQLTNSTLASRSIAQPPHPLRGEINNFHGSVLTPRTIDSNQIFDSICQPKVHSMIKANVCGQQKKVVEAEAKVIPSNFDSCLQQHSVYNARSAFNELAFNQSNLSERSLKYMEQQTSGVGRQNHVNPNMNPSSALNMPQMKTDGGQILEQSQSSGSTSLLGGIPICSGSNLLRTNMISCSVSNPPRVSTSDFRGAHRVGFGLQNNNSTTNAGLCSVPNFTNPSVTSHMNIEGSGQKNLPIDLKNACNALASTDQRIDDDMLQALKIPSLHLEEHVPMGDHIPGFVLNKDVTSQHMKMNVKHEEAYTQLPSGDDLFDVLGVDFKRRLLNGNLDKLLATDSDANAGHLDKKATCMNLQGVDHDNSYTVSEAISDSGIFSGMGTDHLLDAVVSKAQSAAKQNSDEMSCRTTLTRISTASVPSPSCKQVMSDHVVQRGLFDFPKTGTKTAAAETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENGSNVKRESSGSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVRTQLITT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00974 924 MobiDBLite consensus disorder prediction 711 755 - -
Cca04g00974 924 MobiDBLite consensus disorder prediction 730 755 - -
Cca04g00974 924 CDD bHLH_AtLHW_like 744 813 - -
Cca04g00974 924 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 181 IPR025610 -
Cca04g00974 924 MobiDBLite consensus disorder prediction 711 726 - -
Cca04g00974 924 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 740 789 IPR011598 GO:0046983
Cca04g00974 924 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 919 - -
Cca04g00974 924 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 919 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00974 Cca-Chr4 10414768 10421884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00974 541 918 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.571 3.81e-117 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00974 - - gmx:100786351 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00974 04 10414768 10421884 Cca04g00974 04 10414768 10421884 ECH
Cca10g00664 10 7276789 7288081 Cca04g00974 04 10414768 10421884 PCT