Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00950 ATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCGTTGAAAACATTGATAAAGGGCATGCTAAGAAAAAATCCTGAGCATCGGCCAACAGCATCTGAGGTGTTAAAGCACCCCTATTTGCAGCCTTATGTTGACCAATATCGTCCATCTTTCAGTCCTCCAACAACCTGTTCTCCTGAAAAACCAATTTCTGCTGTCAATGATCCTCGAAAAAATATGGCTGAAAGCCAAAACAGCAATAGTTCAAGTAGTGACAAAGATAGTTTGATGTCAAATGAGAAAAACATTGCAACTGAGATAATAAACAAGTTTGCAACAGCAAGGTCTCTCAGCTGA 405 0.4099 MAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPTTCSPEKPISAVNDPRKNMAESQNSNSSSSDKDSLMSNEKNIATEIINKFATARSLS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00950 134 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Cca04g00950 134 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 120 - -
Cca04g00950 134 MobiDBLite consensus disorder prediction 93 117 - -
Cca04g00950 134 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Cca04g00950 134 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 120 - -
Cca04g00950 134 MobiDBLite consensus disorder prediction 73 117 - -
Cca04g00950 134 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00950 Cca-Chr4 10069983 10071269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00950 1 64 MAP Kinase Kinase Kinase AT1G53570 38.462 8.83e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00950 K08857 - ccaj:109799221 258.455