Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00901 atgagTTTTGATTTGAAAGGGTTTGTTTCTCTTGAATCAATGTCTTTAACCTGCGGTGtcttcttcttctccttcaccctcattttctccctcttctcgttcctcctcttcatctCGCGGATGAAGCCCTGGTGTAACTGCCACACCTGCAAGAGCTACTTAACTTTCAGCTGGTGCGCCAAGTTCCCCAACCTCTGCGACTGGTACACGCACCTTCTGCGAAACTCCCCCACGGGAACCATCCACGTGCACGTGTTGGGGAACACCATAACATCAAACCCAGACAACGTCGAGCACATTCTCAAGACAAATTTCCAAAACTACCCCAAAGGGAAACCCTTCTCCGCCATCCTCGGCGATCTTTTGGGCAAAGGAATCTTCAACGTGGACGGCGAGTCATGGAAGTTTCAGCGCAAAATGGCGAGCTTGGAACTCGGAAGCGTCGCGATTCGCTCCTACGCGATGGAGCTCGTGAACCAAGAGATCCAGACGCGCCTCGTCCCTTTCATGGAGTCAAAAACCACTGCAAACGCGGTTTTTGACTTGCAAGACATCCTCAGAAGATTCTCTTTCGACAACATTTGCAAATTCTCCTTCGGTCTCGACCCGGGCTGTCTCCTTCCGGCGTTGCCGGTGTCCGACCTCGCAGTGGCGTTCGACTTGGCGTCGAAGCTTTCCGCGGAGCGCGCCATGACGGCGTCGCCGTTTGTTTGGAAGGCGAAGCGGTTCCTCAACGTGGGGTCGGAGAAGAGGCTGAGGCGAGCCATCGGCGTGGTGAACGACGTGGCTAAGGAGATGATACGACAGCGGAGGGAAATGGGGTCCAACTTCAACGCACGAAATGACCTTCTCTCGCGCTTCATGGGCTCCATAGACGACGACGTTTATTTGCGAGACATTGTCGTGAGTTTTCTTTTGGCCGGTCGCGACACGATTGCCTCCGGGTTGACGGGCTTTTTTAGTTTGCTGTCGGGAAGCCCGGATGTTGAGGCTTTGATCCGGGAGGAGATGGGCCGGGTGGTGGGCCCGGCCCAGGAGTTTCCGAGCTTTGAGCAGTTACGCGAAATGCATTACCTCAGCGCGGCGATTCACGAGAGCATGAGGCTGTTCCCGCCGATTCAGTTCGATTCCAAGTACGCTAGCGAGGATGACGTGTTGCCAGATGGCACTTTCGTACGGAAGGGGAGTAGAGTTACGTATCACCCCTACGCTATGGGCCGGATGGAGCGGATTTGGGGGCCCGATTGTTTGGATTTCAGGCCCGAGAGGTGGTTGCGCGATGGGGTGTTCGTGCCAGCGTGTCCGTTTAAGTACCCGGTTTTTCAGGCTGGGGTAAGGGTGTGTTTGGGGAAGGACTTGGCTTTGATGGAGATGAAGTCCGTTGCGGCTGCGTTGGTCAGACGGTTTGATATCCGGGTTGCGGAGCCGGCTCAGGAGCCCCGATTCGCGCCCGGTTTGACTGCAACCTTGAGAGGCGGGTTGGCGGTTCGGGTTTGTGAGAGAAAATGTTGA 1512 0.5337 MSFDLKGFVSLESMSLTCGVFFFSFTLIFSLFSFLLFISRMKPWCNCHTCKSYLTFSWCAKFPNLCDWYTHLLRNSPTGTIHVHVLGNTITSNPDNVEHILKTNFQNYPKGKPFSAILGDLLGKGIFNVDGESWKFQRKMASLELGSVAIRSYAMELVNQEIQTRLVPFMESKTTANAVFDLQDILRRFSFDNICKFSFGLDPGCLLPALPVSDLAVAFDLASKLSAERAMTASPFVWKAKRFLNVGSEKRLRRAIGVVNDVAKEMIRQRREMGSNFNARNDLLSRFMGSIDDDVYLRDIVVSFLLAGRDTIASGLTGFFSLLSGSPDVEALIREEMGRVVGPAQEFPSFEQLREMHYLSAAIHESMRLFPPIQFDSKYASEDDVLPDGTFVRKGSRVTYHPYAMGRMERIWGPDCLDFRPERWLRDGVFVPACPFKYPVFQAGVRVCLGKDLALMEMKSVAAALVRRFDIRVAEPAQEPRFAPGLTATLRGGLAVRVCERKC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00901 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 Gene3D Cytochrome P450 63 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PANTHER CYTOCHROME P450 94C1 19 500 - -
Cca04g00901 503 SUPERFAMILY Cytochrome P450 63 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PANTHER CYTOCHROME P450 19 500 - -
Cca04g00901 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00901 503 Pfam Cytochrome P450 89 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00901 Cca-Chr4 9516659 9518801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00901 35 501 Cytochrome P450 AT2G27690 61.216 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00901 K20624 - gmx:100813091 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00901 04 9516659 9518801 Cca04g00901 04 9516659 9518801 ECH