Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00863 | ATGTCTCATATTCTTTACTCTGATAAGTACTTCGATGATACTTATGAATATAGACACGTGTCTCTGCCTCGTGAAGTGGCCAAGCTGCTTCCCCGGAATCGACTTCTCTCCGAAATCGAGTGGCGAGCAATTGGGGTTAAGCAGAGCCGTGGTTGGGTTCATTATGCAATTCATCGTCCCGAGCCACAAATTATGCTTTTCAGGAGGCCATTGAATTATCAGCAGCAGCAGGAAAACCAGGCCCAGGCCCAAGCCCAAGATAGTTGA | 267 | 0.4757 | MSHILYSDKYFDDTYEYRHVSLPREVAKLLPRNRLLSEIEWRAIGVKQSRGWVHYAIHRPEPQIMLFRRPLNYQQQQENQAQAQAQDS | 88 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00863 | 88 | Gene3D | - | 1 | 84 | IPR036858 | GO:0016538 | |
Cca04g00863 | 88 | ProSitePatterns | Cyclin-dependent kinases regulatory subunits signature 1. | 6 | 24 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | SUPERFAMILY | Cell cycle regulatory proteins | 2 | 84 | IPR036858 | GO:0016538 | |
Cca04g00863 | 88 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 1 | 87 | - | - | |
Cca04g00863 | 88 | SMART | CKS_2 | 3 | 72 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 40 | 54 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 55 | 69 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 70 | IPR000789 | GO:0016538 | |
Cca04g00863 | 88 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT | 1 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00863 | Cca-Chr4 | 9034013 | 9034748 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00863 | 1 | 82 | Core Cell Cycle Gene Families | AT2G27970 | 82.927 | 5.61e-46 | 140 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00863 | K02219 | - | oeu:111374637 | 139.043 |