Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00839 ATGACCACCATTCTCTCTAACAGCATGAGTAGTGGGCGATTTGGCGGTTTAGGATTTTTAGCACAAGTTCTAAAAGGTCGATGGTTCATGCTTTGTGCCTCTTTCTTCGTCATGGCTGGTGGTGGTTCCGTCTATATCTTTGGATCATACTCCGAAGTAATCAAATCTACACAAGGTTATGATCAAAGCACACTCAACTTTTTGGGGTTTTGTAAGGACCTTGGTGGAAATTTGGGTGCACCAATTGGTCTCATGGGAGAGATTACCCCTCCATGGTTGGTTCTCCTCATTGGATCCCTCCTCAACTTTGTTGGCTACTTCATGATCTGGCTTGTGGTCACTGGCAGAATATACAAACCCCACGTTTGGCAGGTTTGCCTTTACATCGCCATTGGTGCTAGTTCTCAAAACTTTTACAACACTGGAGTAATAACCACCTGCGTCAAAAACTTCCCAGAGAGTAGGGGCACCATATTAGGGTTGTTGAAGGGTTACCTTGGACTCAGTGGAGCCTTCTTGACCCAACTTTACTTGGCCATTTATGGGAATGATTCTGAATCTCTCATCCTTCTCATTGCATGGCTCCCTGCTGCTATACCAATCGTGTTTGCATGTGTGATTCGGATCATGAAGGTTGGAACTAGACAAGCCAACGAGGGGAAGTTAATCACCCAATTTTTTTTCGCTTCAATTGCACTTGCAATATTCATCATGGCTATGATCATTGCTCAGAAACAAGTTGCTTTCTCCAAAGCAGGTTACGCTGGAAGTGTTACTGTGGTATGCCTTCTTCTTATCATTCCTTTGTTCATTGTTATTAGAAAGGAGTTCTTAGAGTGGAACATCAGGGAAAAAGTTGCACACGCACGTACTCCAAATGAGATTGTCACAGAGAAACCACAAATTGTTGAACCTGAGCCTAAAGAATCTCCACTCCCTCTAAATTCTTCTACTTGTTTTGCCAATATATTCAATAAACCTGAAAGAGGAGAGGATCACAGCATACTGCAAGCACTGTTGAGTGTTGACATGATGTTAGTTTTGGTTTCATCATTTGCTGGCTATGGAACAAACGTGTCTATAGTGGACAACTTGGGACAAATTGGCATGTCTCTAGGATACACTGGCAACACAGTGAGATCATTTGTGTCACTTGTGAGCATTTGGAATTACTTTGGGAGGGTCTTGGCTGGTTTTGTGTCAGAAATTTTGCTTGAAAAGTACAAAGTTCCACGCCCTTTGTTGTTGACCTTTTCGCATTTGCTTACATGCATTGGTCACCTTCTCATTGTGTTCTCAGTACCCGGTTCCGTCTACTTTGCATCAGTGATAATTGGATTCTCGTTTGGTATAATGTGGCCAATGTTCTATGCACTTGTCTCTGAACTCTTCGGTCTTAAATATTTTGCCACACTGCAGAATTGTGTGCTCATGATTATTCCCCTTGCATCATATGTGCTAAATGTTAGGGTCACTGGCTTCTTTTACGACAAAGAGGCAACAAAGCAACTCAAAAAAAGTGGCCAAGAGTGGGTGAAGGGCACAGAGTTGACTTGCATTGGAACCGAATGCTACAAGCTTTCTATAATAATATTGGCATGCGTTTCTTTTTTTGCAGCAGTGACTTCTTTGATTCTTGCAATGAGGACCAAGAAGTTCTATAGAAGTGACATATACAAGAAGTTCACCAAGGATGCAACAACTGCAGAAACGGAGTTGACTAAATCCTCGATTCGTAAGGAAGAGCGAGTGGTCAATTAA 1761 0.4231 MTTILSNSMSSGRFGGLGFLAQVLKGRWFMLCASFFVMAGGGSVYIFGSYSEVIKSTQGYDQSTLNFLGFCKDLGGNLGAPIGLMGEITPPWLVLLIGSLLNFVGYFMIWLVVTGRIYKPHVWQVCLYIAIGASSQNFYNTGVITTCVKNFPESRGTILGLLKGYLGLSGAFLTQLYLAIYGNDSESLILLIAWLPAAIPIVFACVIRIMKVGTRQANEGKLITQFFFASIALAIFIMAMIIAQKQVAFSKAGYAGSVTVVCLLLIIPLFIVIRKEFLEWNIREKVAHARTPNEIVTEKPQIVEPEPKESPLPLNSSTCFANIFNKPERGEDHSILQALLSVDMMLVLVSSFAGYGTNVSIVDNLGQIGMSLGYTGNTVRSFVSLVSIWNYFGRVLAGFVSEILLEKYKVPRPLLLTFSHLLTCIGHLLIVFSVPGSVYFASVIIGFSFGIMWPMFYALVSELFGLKYFATLQNCVLMIIPLASYVLNVRVTGFFYDKEATKQLKKSGQEWVKGTELTCIGTECYKLSIIILACVSFFAAVTSLILAMRTKKFYRSDIYKKFTKDATTAETELTKSSIRKEERVVN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00839 586 CDD MFS_Mch1p_like 26 540 - -
Cca04g00839 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 570 - -
Cca04g00839 586 SUPERFAMILY MFS general substrate transporter 27 554 IPR036259 -
Cca04g00839 586 Pfam Nodulin-like 27 273 IPR010658 -
Cca04g00839 586 Gene3D MFS general substrate transporter like domains 339 554 IPR036259 -
Cca04g00839 586 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 570 - -
Cca04g00839 586 Gene3D - 54 88 IPR037071 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00839 Cca-Chr4 8717642 8719402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00839 19 584 Nodulin-like Gene Family AT2G28120 57.618 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00839 - - gmx:100799928 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00839 04 8717642 8719402 Cca04g00839 04 8717642 8719402 ECH