Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00809 ATGCTGGCAAGCCCTTCTATGGCTATAGATAGGAAGAAATTCGTGACCAAATTGGAGGAGGTAGAACTGAGTAATGAATCTGATAATAATGATCACCGTGAATTCTCTCCCAAGAAGTATGGCGAACGTACTGTATCAAATTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTCGAAACAAAGGGCGCAACAGAAGCCCACCAAGCCTCAAGTAAAAATGATCAGGGAGCTTCTGCCTCTGAAGGCAATGAGGAACACATTGGAATGGACGAAGATCAATGGAATCAAGAGAAGAGGTCTAAACTTGAATGCCAGCTTTCCACAGCACCAAACATTGATGGCACAATGATGGGTTTTATGCCATACAGAAGAGGTGGACTTGAGGTTGGTGGTCTTGGATCAGTGTCACTGACTTTAGGGCTTAGGCACGGTGTTGAAGGTGTacaacaacaacaacagctacagcaTGAGGAGGAGCTTAGGCGTCAATTTGGAGGGCACATGATCCATGACTTTGTGGGTTAG 552 0.4348 MLASPSMAIDRKKFVTKLEEVELSNESDNNDHREFSPKKYGERTVSNWFINARVRVWKPMVEEIHMLETKGATEAHQASSKNDQGASASEGNEEHIGMDEDQWNQEKRSKLECQLSTAPNIDGTMMGFMPYRRGGLEVGGLGSVSLTLGLRHGVEGVQQQQQLQHEEELRRQFGGHMIHDFVG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00809 183 MobiDBLite consensus disorder prediction 73 89 - -
Cca04g00809 183 MobiDBLite consensus disorder prediction 71 110 - -
Cca04g00809 183 MobiDBLite consensus disorder prediction 93 108 - -
Cca04g00809 183 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 45 154 - -
Cca04g00809 183 Gene3D - 11 64 - -
Cca04g00809 183 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 45 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00809 Cca-Chr4 8240524 8243331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00809 45 69 Homeobox Transcription Factor Family AT5G02030 100.000 4.64e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00809 - - gmx:100793050 201.06